Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QNK07_RS08005 Genome accession   NZ_CP125981
Coordinates   1512792..1513367 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY06     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507792..1518367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK07_RS07975 (QNK07_07995) dapD 1507978..1508688 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QNK07_RS07980 (QNK07_08000) dapI 1508758..1509882 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  QNK07_RS07985 (QNK07_08005) ykuS 1509944..1510189 (+) 246 WP_003232382.1 YkuS family protein -
  QNK07_RS07990 (QNK07_08010) mscT 1510226..1511029 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  QNK07_RS07995 (QNK07_08015) ahpA 1511266..1511808 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QNK07_RS08000 (QNK07_08020) ykuV 1511880..1512326 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  QNK07_RS08005 (QNK07_08025) rok 1512792..1513367 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QNK07_RS08010 (QNK07_08030) cse15 1513408..1514373 (-) 966 WP_032721476.1 spore protein Cse15 -
  QNK07_RS08015 (QNK07_08035) mobA 1514510..1515109 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  QNK07_RS08020 (QNK07_08040) moeB 1515160..1516179 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  QNK07_RS08025 (QNK07_08045) glp 1516197..1517489 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  QNK07_RS08030 (QNK07_08050) mobB 1517450..1517971 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=833900 QNK07_RS08005 WP_003232378.1 1512792..1513367(+) (rok) [Bacillus subtilis strain ZKY06]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=833900 QNK07_RS08005 WP_003232378.1 1512792..1513367(+) (rok) [Bacillus subtilis strain ZKY06]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1