Detailed information NTG0833865

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QM970_RS19660
• Genome accession: NZ_CP125980
• Coordinates: 3673816..3674961 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3668816..3679961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM970_RS19635 (QM970_19640)	albF	3668832..3670112 (+)	1281	WP_069964371.1	M16 family metallopeptidase	-
QM970_RS19640 (QM970_19645)	albG	3670109..3670810 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QM970_RS19645 (QM970_19650)	ywhL	3670816..3672192 (-)	1377	WP_014481223.1	YncE family protein	-
QM970_RS19650 (QM970_19655)	ywhK	3672231..3673586 (-)	1356	WP_014481224.1	YncE family protein	-
QM970_RS19655	-	3673583..3673813 (-)	231	Protein_3812	hypothetical protein	-
QM970_RS19660 (QM970_19660)	rapF	3673816..3674961 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
QM970_RS19665 (QM970_19665)	phrF	3674945..3675064 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QM970_RS19670 (QM970_19670)	-	3675162..3675589 (+)	428	Protein_3815	YbaK/EbsC family protein	-
QM970_RS19675 (QM970_19675)	speB	3675654..3676526 (-)	873	WP_003227545.1	agmatinase	-
QM970_RS19680 (QM970_19680)	speE	3676587..3677417 (-)	831	WP_003227543.1	spermidine synthase	-
QM970_RS19685 (QM970_19685)	pbpG	3677620..3679695 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=833865 QM970_RS19660 WP_014481226.1 3673816..3674961(+) (rapF) [Bacillus subtilis strain ZKY03]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=833865 QM970_RS19660 WP_014481226.1 3673816..3674961(+) (rapF) [Bacillus subtilis strain ZKY03]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572