Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SR852_RS03355 Genome accession   NZ_CP140161
Coordinates   663229..664023 (+) Length   264 a.a.
NCBI ID   WP_011198493.1    Uniprot ID   Q65CS1
Organism   Bacillus licheniformis strain ATCC 14580     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 658229..669023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR852_RS03335 (SR852_03335) walR 658466..659173 (+) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -
  SR852_RS03340 (SR852_03340) walK 659181..661025 (+) 1845 WP_009330019.1 cell wall metabolism sensor histidine kinase WalK -
  SR852_RS03345 (SR852_03345) - 661015..662379 (+) 1365 WP_003177963.1 YycH family regulatory protein -
  SR852_RS03350 (SR852_03350) - 662366..663214 (+) 849 WP_011198494.1 two-component system regulatory protein YycI -
  SR852_RS03355 (SR852_03355) vicX 663229..664023 (+) 795 WP_011198493.1 MBL fold metallo-hydrolase Regulator
  SR852_RS03360 (SR852_03360) htrA 664106..665317 (+) 1212 WP_011198492.1 S1C family serine protease Regulator
  SR852_RS03365 (SR852_03365) - 665614..666459 (+) 846 WP_011198491.1 SAM hydrolase/SAM-dependent halogenase family protein -
  SR852_RS03370 (SR852_03370) - 666716..667186 (+) 471 WP_003177954.1 membrane protein -
  SR852_RS03375 (SR852_03375) - 667217..667735 (+) 519 WP_011201784.1 GNAT family N-acetyltransferase -
  SR852_RS03380 (SR852_03380) - 668166..668648 (+) 483 WP_009330015.1 DUF4234 domain-containing protein -
  SR852_RS03385 (SR852_03385) - 668847..669005 (+) 159 WP_003177948.1 CxxH/CxxC protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29218.20 Da        Isoelectric Point: 5.9802

>NTDB_id=833845 SR852_RS03355 WP_011198493.1 663229..664023(+) (vicX) [Bacillus licheniformis strain ATCC 14580]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGNETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=833845 SR852_RS03355 WP_011198493.1 663229..664023(+) (vicX) [Bacillus licheniformis strain ATCC 14580]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCAATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCAAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65CS1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53