Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SR852_RS02875 Genome accession   NZ_CP140161
Coordinates   575840..576667 (-) Length   275 a.a.
NCBI ID   WP_003178162.1    Uniprot ID   Q65PI9
Organism   Bacillus licheniformis strain ATCC 14580     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 570840..581667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR852_RS02850 (SR852_02850) abrB 573186..573476 (+) 291 WP_085959887.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  SR852_RS02855 (SR852_02855) rsmI 573525..574400 (-) 876 WP_025805862.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  SR852_RS02860 (SR852_02860) - 574375..574668 (-) 294 WP_003178169.1 GIY-YIG nuclease family protein -
  SR852_RS02865 (SR852_02865) - 574655..575398 (-) 744 WP_003178166.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  SR852_RS02870 (SR852_02870) yabA 575463..575825 (-) 363 WP_003178164.1 DNA replication initiation control protein YabA -
  SR852_RS02875 (SR852_02875) yaaT 575840..576667 (-) 828 WP_003178162.1 PSP1 domain-containing protein Regulator
  SR852_RS02880 (SR852_02880) holB 576670..577659 (-) 990 WP_003178160.1 DNA polymerase III subunit delta' -
  SR852_RS02885 (SR852_02885) - 577671..578111 (-) 441 WP_003178158.1 YaaR family protein -
  SR852_RS02890 (SR852_02890) - 578123..578452 (-) 330 WP_003178156.1 cyclic-di-AMP receptor -
  SR852_RS02895 (SR852_02895) tmk 578528..579166 (-) 639 WP_003178154.1 dTMP kinase -
  SR852_RS02900 (SR852_02900) - 579163..580605 (-) 1443 WP_011197464.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 30998.69 Da        Isoelectric Point: 4.6295

>NTDB_id=833839 SR852_RS02875 WP_003178162.1 575840..576667(-) (yaaT) [Bacillus licheniformis strain ATCC 14580]
MYNVIGVRFKKAGKIYYFDPNGFQIDKDSCVIVETVRGVEYGQVVIANKKVDENDVVLPLRKVIRVADERDRLIVEENQE
AALSAFDVCQKKVNEHGLEMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEVIATSSGPAKVVGLNI
LERILQVELTDCDKVVEYTWDELLQEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=833839 SR852_RS02875 WP_003178162.1 575840..576667(-) (yaaT) [Bacillus licheniformis strain ATCC 14580]
TTGTACAACGTTATTGGTGTCCGCTTTAAAAAAGCGGGCAAAATATATTATTTCGATCCGAACGGATTTCAGATAGATAA
AGACAGCTGTGTGATCGTCGAAACGGTTCGCGGTGTTGAATACGGGCAGGTTGTCATTGCCAACAAGAAAGTAGACGAGA
ACGATGTCGTGCTGCCTTTAAGAAAAGTGATCAGAGTTGCGGATGAACGCGACCGCCTGATCGTTGAGGAGAATCAAGAA
GCTGCGCTGTCCGCCTTTGATGTCTGCCAGAAAAAGGTTAACGAGCACGGCCTTGAGATGAAACTGGTCGATGTGGAATT
CACTTTTGACCGCAACAAAGTCATTTTTTATTTTACGGCTGATGGAAGAGTCGATTTTAGAGAACTCGTCAAAGATTTGG
CATCGATCTTTAAAACGAGAATCGAGCTGAGACAAATCGGCGTCAGAGATGAAGCGAAGATGCTCGGCGGTATCGGACCG
TGTGGAAGAATGCTTTGCTGTTCCACGTTTTTAGGTGATTTTGAGCCCGTTTCTATTAAAATGGCAAAGGATCAAAATCT
GTCGCTGAATCCGACGAAGATTTCCGGACTATGCGGACGGCTGATGTGCTGTCTAAAGTATGAAAACGATGAATACGAAA
CAGCCAAAGAACAGCTTCCGGATATCGGGGAAGTGATCGCCACGTCCAGCGGCCCGGCAAAAGTCGTCGGGTTGAATATT
CTCGAACGCATTCTCCAGGTTGAACTGACAGACTGCGACAAAGTTGTTGAATATACGTGGGATGAGCTGTTGCAAGAAGG
TGTCGTATCTGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65PI9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

90.909

100

0.909