Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QM970_RS04670 Genome accession   NZ_CP125980
Coordinates   913417..914211 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain ZKY03     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 908417..919211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM970_RS04640 (QM970_04645) sxzA 909256..910287 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  QM970_RS04645 (QM970_04650) yfhB 910402..911283 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  QM970_RS04650 (QM970_04655) yfhC 911371..911955 (+) 585 WP_032723010.1 nitroreductase -
  QM970_RS04655 (QM970_04660) yfhD 911994..912185 (-) 192 WP_003233561.1 YfhD family protein -
  QM970_RS04660 (QM970_04665) yfhE 912252..912362 (-) 111 WP_003223230.1 YfhE family protein -
  QM970_RS04665 (QM970_04670) yfhF 912417..913328 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  QM970_RS04670 (QM970_04675) recX 913417..914211 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  QM970_RS04675 (QM970_04680) yfhH 914213..914527 (+) 315 WP_003244592.1 YfhH family protein -
  QM970_RS04680 (QM970_04685) yfhI 914670..915863 (+) 1194 WP_003243500.1 MFS transporter -
  QM970_RS04685 (QM970_04690) sspK 915895..916047 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QM970_RS04690 (QM970_04695) yfhJ 916172..916441 (+) 270 WP_003243789.1 YfhJ family protein -
  QM970_RS04695 (QM970_04700) - 916552..917702 (+) 1151 WP_087614160.1 IS3 family transposase -
  QM970_RS04700 (QM970_04705) yfhK 917876..918394 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  QM970_RS04705 (QM970_04710) spdL 918479..918811 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=833805 QM970_RS04670 WP_014479217.1 913417..914211(+) (recX) [Bacillus subtilis strain ZKY03]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=833805 QM970_RS04670 WP_014479217.1 913417..914211(+) (recX) [Bacillus subtilis strain ZKY03]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992