Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   R8568_RS02645 Genome accession   NZ_AP026931
Coordinates   528205..528471 (+) Length   88 a.a.
NCBI ID   WP_001810535.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900701541     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 523205..533471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8568_RS02625 (PC1520_05210) - 523460..523969 (+) 510 WP_000619939.1 N-acetyltransferase -
  R8568_RS02630 (PC1520_05220) pheT 524046..526451 (+) 2406 WP_061667326.1 phenylalanine--tRNA ligase subunit beta -
  R8568_RS02635 (PC1520_05230) - 526519..527520 (-) 1002 WP_000597986.1 endonuclease/exonuclease/phosphatase family protein -
  R8568_RS02640 - 527676..528079 (+) 404 Protein_524 helix-turn-helix domain-containing protein -
  R8568_RS02645 (PC1520_05250) HI0659 528205..528471 (+) 267 WP_001810535.1 helix-turn-helix domain-containing protein Machinery gene
  R8568_RS02650 (PC1520_05260) metE 528732..530981 (+) 2250 WP_000108188.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  R8568_RS02655 (PC1520_05270) metF 531045..531911 (+) 867 WP_000089983.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 88 a.a.        Molecular weight: 9608.13 Da        Isoelectric Point: 4.4893

>NTDB_id=83376 R8568_RS02645 WP_001810535.1 528205..528471(+) (HI0659) [Streptococcus pneumoniae strain PZ900701541]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VPLEQGKS

Nucleotide


Download         Length: 267 bp        

>NTDB_id=83376 R8568_RS02645 WP_001810535.1 528205..528471(+) (HI0659) [Streptococcus pneumoniae strain PZ900701541]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(29-79)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.74

87.5

0.523

Multiple sequence alignment