Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QMY55_RS19865 Genome accession   NZ_CP125947
Coordinates   4262010..4262414 (-) Length   134 a.a.
NCBI ID   WP_218240991.1    Uniprot ID   -
Organism   Comamonas resistens strain ZM22     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4257010..4267414
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY55_RS19850 (QMY55_19850) - 4258843..4261086 (-) 2244 WP_283485834.1 methyl-accepting chemotaxis protein -
  QMY55_RS19855 (QMY55_19855) - 4261106..4261633 (-) 528 WP_283485835.1 chemotaxis protein CheW -
  QMY55_RS19860 (QMY55_19860) - 4261648..4262010 (-) 363 WP_283485836.1 PleD family two-component system response regulator -
  QMY55_RS19865 (QMY55_19865) pilG 4262010..4262414 (-) 405 WP_218240991.1 PleD family two-component system response regulator Regulator
  QMY55_RS19870 (QMY55_19870) - 4262468..4262620 (-) 153 WP_283485837.1 rubredoxin -
  QMY55_RS19875 (QMY55_19875) - 4262736..4263710 (+) 975 WP_283485838.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  QMY55_RS19880 (QMY55_19880) hemL 4263694..4264998 (+) 1305 WP_283485839.1 glutamate-1-semialdehyde 2,1-aminomutase -
  QMY55_RS19885 (QMY55_19885) - 4265393..4267123 (+) 1731 WP_283489020.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14727.95 Da        Isoelectric Point: 7.6686

>NTDB_id=833643 QMY55_RS19865 WP_218240991.1 4262010..4262414(-) (pilG) [Comamonas resistens strain ZM22]
MTASSVPLRVLVVDDSNTIRRSAEIFLKQGGYEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
NTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQSAGVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=833643 QMY55_RS19865 WP_218240991.1 4262010..4262414(-) (pilG) [Comamonas resistens strain ZM22]
GTGACAGCATCCAGCGTGCCCTTGCGGGTTCTGGTGGTGGATGACAGCAACACCATTCGCCGCAGCGCGGAAATCTTCCT
CAAGCAGGGTGGCTATGAGGTGCTGCTGGCCGATGATGGCTTCGATGCCCTCTCCAAGGTCAACGACTACCAGCCCCAGC
TCATCTTCTGCGACATCCTGATGCCCAAGCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAACGCCCGTTTCTCG
AATACGCCTGTGGTGATGCTGTCCTCCAAGGATGGTGTCTTCGACAAGGCGCGTGGCCGCATGGTCGGCTGCCAGGACTA
TCTGACCAAACCGTTTACCAAAGATCAATTGCTGCAGGCCGTCGAACAGTTCGGCAAGCAGTCAGCAGGTGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.649

85.075

0.507