Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   U0N78_RS06305 Genome accession   NZ_CP140109
Coordinates   1282528..1283202 (+) Length   224 a.a.
NCBI ID   WP_231640460.1    Uniprot ID   -
Organism   Streptococcus suis strain 2022WUSS148     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1277528..1288202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0N78_RS06275 (U0N78_06275) - 1278657..1278797 (+) 141 WP_032500004.1 hypothetical protein -
  U0N78_RS06280 (U0N78_06280) - 1278810..1279193 (+) 384 WP_043025610.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  U0N78_RS06285 (U0N78_06285) - 1279210..1279962 (+) 753 WP_029173099.1 ABC transporter ATP-binding protein -
  U0N78_RS06290 (U0N78_06290) - 1279963..1281909 (+) 1947 WP_043025612.1 FtsX-like permease family protein -
  U0N78_RS06295 (U0N78_06295) relB 1282000..1282239 (+) 240 WP_015646833.1 type II toxin-antitoxin system RelB family antitoxin -
  U0N78_RS06300 (U0N78_06300) - 1282229..1282495 (+) 267 WP_032510493.1 type II toxin-antitoxin system RelE family toxin -
  U0N78_RS06305 (U0N78_06305) braR 1282528..1283202 (+) 675 WP_231640460.1 response regulator transcription factor Regulator
  U0N78_RS06310 (U0N78_06310) - 1283199..1284140 (+) 942 WP_043025617.1 sensor histidine kinase -
  U0N78_RS11785 - 1284084..1284391 (-) 308 Protein_1208 hypothetical protein -
  U0N78_RS06315 (U0N78_06315) - 1284500..1285621 (+) 1122 WP_029178298.1 IS110 family transposase -
  U0N78_RS06320 (U0N78_06320) - 1285996..1287190 (-) 1195 Protein_1210 IS1182 family transposase -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25819.79 Da        Isoelectric Point: 5.4481

>NTDB_id=833154 U0N78_RS06305 WP_231640460.1 1282528..1283202(+) (braR) [Streptococcus suis strain 2022WUSS148]
MKKMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPII
FISSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFTNKSEQVQLSPTETK
ILSALLERQGQIVSKEELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFDRIHTVRGVGYLVK

Nucleotide


Download         Length: 675 bp        

>NTDB_id=833154 U0N78_RS06305 WP_231640460.1 1282528..1283202(+) (braR) [Streptococcus suis strain 2022WUSS148]
ATGAAGAAGATGAAAAAAGAAAAGATTTATATTGTTGAAGACGATGAGATGATTGTCCAACTCTTGAAGCAACACCTGGG
CAAATCGTATCAGGTAGAAAGTGTTCAGAATTTTCGAGCTGTCAGTCAGGAAGTGGCTGAAATCAAGCCAGACTTGGTGC
TGATGGACATTAGCCTGCCTTATTACAACGGCTTTTACTGGACGACGGAAATCCGTAAAACCATGACCATGCCCATTATT
TTTATCTCTTCTAGCGATGATGAGATGAATGCAGTCATGGCCATGAACATGGGTGGCGATGATTTTGTATCCAAGCCTTT
TTCACTGGGAATTTTGGATGCCAAAATCGGTGCCTTTCTGCGTCGGGTCAATCAATTTAGCAAATCAACCGATTTGTCTA
TCGACCAATTCCAACTTAGTTTAGACGGGCGATTTACAAACAAATCGGAACAGGTTCAATTGTCTCCAACAGAAACCAAG
ATTTTGTCCGCCTTGCTAGAAAGACAAGGGCAGATTGTTAGTAAAGAGGAACTCTTGGAAAAACTCTGGGAAAATGAAGA
ATTTATCGACCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTAAGTGAAGTTGGTTTTGACCGTATTC
ATACTGTTCGAGGTGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(9-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.727

98.214

0.469