Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | R8624_RS08390 | Genome accession | NZ_AP026930 |
| Coordinates | 1651002..1651961 (+) | Length | 319 a.a. |
| NCBI ID | WP_000777248.1 | Uniprot ID | A0A0H2ZMI3 |
| Organism | Streptococcus pneumoniae strain PZ900701208 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1646002..1656961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8624_RS08360 (PC1195_16540) | - | 1646202..1646966 (-) | 765 | WP_000082879.1 | nuclear transport factor 2 family protein | - |
| R8624_RS08365 (PC1195_16550) | - | 1646970..1647413 (-) | 444 | WP_000655202.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| R8624_RS08370 (PC1195_16560) | - | 1648095..1648391 (-) | 297 | WP_000840137.1 | bacteriocin immunity protein | - |
| R8624_RS08375 (PC1195_16570) | pepA | 1648413..1649477 (-) | 1065 | WP_000209199.1 | glutamyl aminopeptidase | - |
| R8624_RS08380 (PC1195_16580) | - | 1649878..1650579 (+) | 702 | WP_317650116.1 | UDP-glucose 4-epimerase | - |
| R8624_RS08385 | - | 1650595..1650705 (+) | 111 | WP_001108391.1 | hypothetical protein | - |
| R8624_RS08390 (PC1195_16590) | ceuB | 1651002..1651961 (+) | 960 | WP_000777248.1 | ABC transporter permease | Machinery gene |
| R8624_RS08395 (PC1195_16600) | - | 1651951..1652907 (+) | 957 | WP_001193667.1 | iron chelate uptake ABC transporter family permease subunit | - |
| R8624_RS08400 (PC1195_16610) | - | 1652904..1653656 (+) | 753 | WP_000764303.1 | ABC transporter ATP-binding protein | - |
| R8624_RS08405 (PC1195_16620) | - | 1653752..1654717 (+) | 966 | WP_050311641.1 | siderophore ABC transporter substrate-binding protein | - |
| R8624_RS08410 (PC1195_16630) | yidD | 1654942..1655184 (-) | 243 | WP_000821636.1 | membrane protein insertion efficiency factor YidD | - |
| R8624_RS08415 (PC1195_16640) | - | 1655184..1655906 (-) | 723 | WP_001222228.1 | pseudouridine synthase | - |
| R8624_RS08420 (PC1195_16650) | scpB | 1655893..1656462 (-) | 570 | WP_000105310.1 | SMC-Scp complex subunit ScpB | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35418.29 Da Isoelectric Point: 9.7465
>NTDB_id=83311 R8624_RS08390 WP_000777248.1 1651002..1651961(+) (ceuB) [Streptococcus pneumoniae strain PZ900701208]
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST
VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL
VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG
GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD
Nucleotide
Download Length: 960 bp
>NTDB_id=83311 R8624_RS08390 WP_000777248.1 1651002..1651961(+) (ceuB) [Streptococcus pneumoniae strain PZ900701208]
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC
ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC
TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA
GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTTTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT
GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT
GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG
GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT
CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTAGGGAAAGAAACCAGCGAGAGTTTGG
GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT
GGCCTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT
GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG
TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
37.419 |
97.179 |
0.364 |