Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   QM317_RS08030 Genome accession   NZ_CP125861
Coordinates   1691019..1691906 (+) Length   295 a.a.
NCBI ID   WP_000143427.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 12-03119     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1686019..1696906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QM317_RS08000 (QM317_07985) - 1686751..1687512 (+) 762 WP_000323441.1 alpha/beta hydrolase family protein -
  QM317_RS08005 (QM317_07990) - 1687757..1688212 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  QM317_RS08010 (QM317_07995) - 1688334..1688435 (+) 102 WP_000731976.1 SE2200 family small protein -
  QM317_RS08015 (QM317_08000) - 1688495..1689919 (-) 1425 WP_000953748.1 alkaline phosphatase -
  QM317_RS08020 (QM317_08005) - 1690117..1690317 (+) 201 WP_000604727.1 hypothetical protein -
  QM317_RS08025 (QM317_08010) braR 1690343..1691008 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  QM317_RS08030 (QM317_08015) braS 1691019..1691906 (+) 888 WP_000143427.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  QM317_RS08035 (QM317_08020) - 1692014..1692769 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  QM317_RS08040 (QM317_08025) - 1692766..1694766 (+) 2001 WP_000776738.1 ABC transporter permease -
  QM317_RS08045 (QM317_08030) - 1695425..1695538 (+) 114 WP_011447078.1 hypothetical protein -
  QM317_RS08050 (QM317_08035) - 1695920..1696180 (+) 261 WP_001789910.1 hypothetical protein -
  QM317_RS08055 (QM317_08040) - 1696190..1696687 (+) 498 WP_001065268.1 glutathione peroxidase -
  QM317_RS08060 (QM317_08045) - 1696795..1696878 (-) 84 WP_031797553.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34058.35 Da        Isoelectric Point: 5.6439

>NTDB_id=833062 QM317_RS08030 WP_000143427.1 1691019..1691906(+) (braS) [Staphylococcus aureus strain 12-03119]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHYEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=833062 QM317_RS08030 WP_000143427.1 1691019..1691906(+) (braS) [Staphylococcus aureus strain 12-03119]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATTACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993