Detailed information NTG0833045

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: I3F59_RS08665
• Genome accession: NZ_CP140097
• Coordinates: 1954731..1956014 (-)
• Length: 427 a.a.
• NCBI ID: WP_240138660.1
• Uniprot ID: A0ABT6HS26
• Organism: Streptomyces sp. MUM 178J
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1949731..1961014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I3F59_RS08655 (I3F59_008655)	-	1950962..1953586 (-)	2625	WP_240138658.1	valine--tRNA ligase	-
I3F59_RS08660 (I3F59_008660)	-	1953724..1954656 (+)	933	WP_240138659.1	hypothetical protein	-
I3F59_RS08665 (I3F59_008665)	clpX	1954731..1956014 (-)	1284	WP_240138660.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
I3F59_RS08670 (I3F59_008670)	clpP	1956160..1956834 (-)	675	WP_275675214.1	ATP-dependent Clp protease proteolytic subunit	Regulator
I3F59_RS08675 (I3F59_008675)	-	1956884..1957489 (-)	606	WP_240138699.1	ATP-dependent Clp protease proteolytic subunit	-
I3F59_RS08680 (I3F59_008680)	tig	1957782..1959212 (-)	1431	WP_240138662.1	trigger factor	-
I3F59_RS08695 (I3F59_008695)	-	1959739..1959933 (-)	195	WP_240138663.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46739.65 Da
• Isoelectric Point: 4.9356

>NTDB_id=833045 I3F59_RS08665 WP_240138660.1 1954731..1956014(-) (clpX) [Streptomyces sp. MUM 178J]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGPQGRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLKILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHNNVNPTLVPRIVKNDGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=833045 I3F59_RS08665 WP_240138660.1 1954731..1956014(-) (clpX) [Streptomyces sp. MUM 178J]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAATGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGCTGGGAGGAACTCCCCAAGCCGCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCCAAGAAGGCCCTCTCGGTCGCGGTCTACAACCACTACAAGCGTGTCCAGGCCGGTGAGAACGGCGGCCCGCAGGGCCG
GGACGACGGCATCGAACTCGCCAAATCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCGGACGCCACCGCGCTCACCGAGGCGGGCTATGTCGGCGAGGAT
GTTGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAATCCGTCGATCACCCGGGATGTCTCCGGCGAGGGCGTCCAACAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCTCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAATCCCGTGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATTCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCTCCGTCCACAACCTCGACCGC
GAGGCCCTTCTCAAGATCCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGACCGCCCCGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCGGCACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCACGGGTGGTCATCACG
GCGGATGTGGTCCACAACAACGTGAACCCGACGCTGGTCCCACGGATCGTCAAGAACGACGGCCGCCACGAGAAGAGCGC
ATAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.253	0.518