Detailed information NTG0832965

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: U0032_RS03955
• Genome accession: NZ_CP140008
• Coordinates: 823153..824385 (-)
• Length: 410 a.a.
• NCBI ID: WP_001153640.1
• Uniprot ID: Q072Q7
• Organism: Escherichia coli strain ATCC 11303
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 818153..829385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0032_RS03935 (U0032_03935)	-	818793..819490 (+)	698	WP_094096600.1	IS1-like element IS1A family transposase	-
U0032_RS03940 (U0032_03940)	-	819602..820192 (+)	591	WP_000405439.1	SDR family NAD(P)-dependent oxidoreductase	-
U0032_RS03945 (U0032_03945)	-	820766..821905 (+)	1140	WP_000069818.1	hypothetical protein	-
U0032_RS03950 (U0032_03950)	-	821940..822899 (+)	960	WP_000991482.1	hypothetical protein	-
U0032_RS03955 (U0032_03955)	kpsS	823153..824385 (-)	1233	WP_001153640.1	capsule biosynthesis protein	Regulator
U0032_RS03960 (U0032_03960)	-	824420..826447 (-)	2028	WP_000579244.1	capsular polysaccharide biosynthesis protein	-
U0032_RS03965 (U0032_03965)	kdsB	826444..827184 (-)	741	WP_000030740.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
U0032_RS03970 (U0032_03970)	-	827194..828870 (-)	1677	WP_012767757.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 49050.74 Da
• Isoelectric Point: 10.0880

>NTDB_id=832965 U0032_RS03955 WP_001153640.1 823153..824385(-) (kpsS) [Escherichia coli strain ATCC 11303]
MQDNALTILLSGKKYLLLQGPMGPFFNDVAEWLESLDRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYKGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKLD
KYFQSLSRQV

Nucleotide

• Length: 1233 bp

>NTDB_id=832965 U0032_RS03955 WP_001153640.1 823153..824385(-) (kpsS) [Escherichia coli strain ATCC 11303]
ATGCAAGACAACGCACTAACCATTTTATTATCGGGTAAAAAATATCTGCTATTGCAGGGGCCAATGGGACCCTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGACCGTAACGCTGTGAATGTTGTCTTCAACGGCGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGTTGGCTGCGAGATCTCCACCGACAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGCCCGCAATTTATAACCGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGACCCGGATTTTTATCGTAAGTTGCCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCATTTTCCCCGTGGTATGAAGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAATGAGCTGGATCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATATACGTGCACGATCTCCCAATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATAAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTGTTGGTTAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAACTGGAT
AAATATTTTCAGAGCTTGTCGCGTCAAGTATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: Q072Q7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.646	96.585	0.383