Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QMY17_RS14340 Genome accession   NZ_CP125812
Coordinates   2668475..2668939 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain N3378-3At     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2663475..2673939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMY17_RS14320 fadH 2664663..2665427 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  QMY17_RS14325 ppeE 2665570..2666430 (+) 861 WP_003232400.1 metallophosphoesterase -
  QMY17_RS14330 ltdD 2666487..2666981 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  QMY17_RS14335 ykuC 2667057..2668349 (+) 1293 WP_014479656.1 MFS transporter -
  QMY17_RS14340 kre 2668475..2668939 (+) 465 WP_003232406.1 YkyB family protein Regulator
  QMY17_RS14345 cheV 2668983..2669894 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  QMY17_RS14350 - 2670098..2670259 (+) 162 WP_003245246.1 hypothetical protein -
  QMY17_RS14355 dapX 2670461..2671642 (+) 1182 WP_014479654.1 aminotransferase A -
  QMY17_RS14360 kinA 2671639..2673468 (-) 1830 WP_014479653.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=832955 QMY17_RS14340 WP_003232406.1 2668475..2668939(+) (kre) [Bacillus subtilis strain N3378-3At]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=832955 QMY17_RS14340 WP_003232406.1 2668475..2668939(+) (kre) [Bacillus subtilis strain N3378-3At]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1