Detailed information NTG0832852

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U0533_RS06855
• Genome accession: NZ_CP139953
• Coordinates: 1404198..1405181 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain Nord1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1399198..1410181

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0533_RS06840 (U0533_06840)	dppA	1400498..1402105 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
U0533_RS06845 (U0533_06845)	dppB	1402256..1403275 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
U0533_RS06850 (U0533_06850)	dppC	1403285..1404187 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U0533_RS06855 (U0533_06855)	amiE	1404198..1405181 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
U0533_RS06860 (U0533_06860)	dppF	1405178..1406182 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U0533_RS06865 (U0533_06865)	yhjV	1406212..1407483 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
U0533_RS06870 (U0533_06870)	-	1407959..1408066 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0533_RS06875 (U0533_06875)	-	1408443..1408550 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0533_RS06880 (U0533_06880)	-	1408926..1409033 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=832852 U0533_RS06855 WP_001196487.1 1404198..1405181(+) (amiE) [Escherichia coli strain Nord1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=832852 U0533_RS06855 WP_001196487.1 1404198..1405181(+) (amiE) [Escherichia coli strain Nord1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407