Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QLQ05_RS21450 Genome accession   NZ_CP125762
Coordinates   3999264..4000214 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain KRS015     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3994264..4005214
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS21430 ycnB 3995132..3996550 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  QLQ05_RS21435 yclQ 3996597..3997550 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QLQ05_RS21440 yclP 3997572..3998330 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  QLQ05_RS21445 yclO 3998324..3999271 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  QLQ05_RS21450 ceuB 3999264..4000214 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  QLQ05_RS21455 thrD 4000599..4001963 (+) 1365 WP_003234493.1 aspartate kinase -
  QLQ05_RS21460 yczN 4002117..4002230 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  QLQ05_RS21465 yczM 4002312..4002401 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  QLQ05_RS21470 phrC 4002501..4002623 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  QLQ05_RS21475 rapC 4002607..4003755 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=832745 QLQ05_RS21450 WP_003234491.1 3999264..4000214(-) (ceuB) [Bacillus subtilis strain KRS015]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=832745 QLQ05_RS21450 WP_003234491.1 3999264..4000214(-) (ceuB) [Bacillus subtilis strain KRS015]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522