Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QLQ05_RS18915 Genome accession   NZ_CP125762
Coordinates   3506158..3506952 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain KRS015     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3501158..3511952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS18880 ephM 3502000..3502860 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  QLQ05_RS18885 spdL 3502847..3503179 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  QLQ05_RS18890 yfhK 3503264..3503782 (-) 519 WP_003243363.1 SH3 domain-containing protein -
  QLQ05_RS18895 yfhJ 3503927..3504196 (-) 270 WP_003243789.1 YfhJ family protein -
  QLQ05_RS18900 sspK 3504321..3504473 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QLQ05_RS18905 yfhI 3504506..3505699 (-) 1194 WP_003243500.1 MFS transporter -
  QLQ05_RS18910 yfhH 3505842..3506156 (-) 315 WP_003244592.1 YfhH family protein -
  QLQ05_RS18915 recX 3506158..3506952 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  QLQ05_RS18920 yfhF 3507041..3507952 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  QLQ05_RS18925 yfhE 3508007..3508117 (+) 111 WP_003223230.1 YfhE family protein -
  QLQ05_RS18930 yfhD 3508184..3508375 (+) 192 WP_003233561.1 YfhD family protein -
  QLQ05_RS18935 yfhC 3508414..3508998 (-) 585 WP_003243940.1 nitroreductase -
  QLQ05_RS18940 yfhB 3509086..3509967 (-) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  QLQ05_RS18945 sxzA 3510082..3511113 (-) 1032 WP_003243057.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=832738 QLQ05_RS18915 WP_003243354.1 3506158..3506952(-) (recX) [Bacillus subtilis strain KRS015]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=832738 QLQ05_RS18915 WP_003243354.1 3506158..3506952(-) (recX) [Bacillus subtilis strain KRS015]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1