Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QLQ05_RS17395 Genome accession   NZ_CP125762
Coordinates   3225002..3225955 (-) Length   317 a.a.
NCBI ID   WP_003245494.1    Uniprot ID   A0AAE2SG99
Organism   Bacillus subtilis strain KRS015     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3220002..3230955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS17365 appD 3220121..3221107 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  QLQ05_RS17370 yjaZ 3221299..3222084 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  QLQ05_RS17375 fabF 3222160..3223401 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  QLQ05_RS17380 fabH 3223424..3224362 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  QLQ05_RS17385 yjzB 3224527..3224766 (+) 240 WP_003232972.1 spore coat protein YjzB -
  QLQ05_RS17390 comZ 3224796..3224987 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QLQ05_RS17395 med 3225002..3225955 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  QLQ05_RS17400 - 3226046..3226603 (-) 558 WP_003232974.1 hypothetical protein -
  QLQ05_RS17405 - 3226685..3227419 (-) 735 WP_003245223.1 hypothetical protein -
  QLQ05_RS17410 yjzD 3227668..3227853 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  QLQ05_RS17415 yjzC 3227899..3228078 (-) 180 WP_003245356.1 YjzC family protein -
  QLQ05_RS17420 argF 3228164..3229123 (-) 960 WP_003232980.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.80 Da        Isoelectric Point: 4.5457

>NTDB_id=832730 QLQ05_RS17395 WP_003245494.1 3225002..3225955(-) (med) [Bacillus subtilis strain KRS015]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=832730 QLQ05_RS17395 WP_003245494.1 3225002..3225955(-) (med) [Bacillus subtilis strain KRS015]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

100

100

1