Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QLQ05_RS15895 Genome accession   NZ_CP125762
Coordinates   2957556..2958020 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain KRS015     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2952556..2963020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS15875 fadH 2953744..2954508 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  QLQ05_RS15880 ppeE 2954651..2955511 (+) 861 WP_003232400.1 metallophosphoesterase -
  QLQ05_RS15885 ltdD 2955568..2956062 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  QLQ05_RS15890 ykuC 2956138..2957430 (+) 1293 WP_003245267.1 MFS transporter -
  QLQ05_RS15895 kre 2957556..2958020 (+) 465 WP_003232406.1 YkyB family protein Regulator
  QLQ05_RS15900 cheV 2958064..2958975 (-) 912 WP_009967126.1 chemotaxis protein CheV -
  QLQ05_RS15905 - 2959179..2959340 (+) 162 WP_003245246.1 hypothetical protein -
  QLQ05_RS15910 dapX 2959542..2960723 (+) 1182 WP_003232415.1 aminotransferase A -
  QLQ05_RS15915 kinA 2960734..2962554 (-) 1821 WP_003245779.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=832721 QLQ05_RS15895 WP_003232406.1 2957556..2958020(+) (kre) [Bacillus subtilis strain KRS015]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=832721 QLQ05_RS15895 WP_003232406.1 2957556..2958020(+) (kre) [Bacillus subtilis strain KRS015]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1