Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QLQ05_RS15780 Genome accession   NZ_CP125762
Coordinates   2938218..2938793 (-) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain KRS015     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2933218..2943793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS15755 mobB 2933614..2934135 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QLQ05_RS15760 glp 2934096..2935388 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  QLQ05_RS15765 moeB 2935406..2936425 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  QLQ05_RS15770 mobA 2936476..2937075 (-) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  QLQ05_RS15775 cse15 2937212..2938177 (+) 966 WP_003245018.1 spore protein Cse15 -
  QLQ05_RS15780 rok 2938218..2938793 (-) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  QLQ05_RS15785 ykuV 2939259..2939705 (-) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  QLQ05_RS15790 ahpA 2939777..2940319 (-) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  QLQ05_RS15795 mscT 2940556..2941359 (+) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  QLQ05_RS15800 ykuS 2941396..2941641 (-) 246 WP_003232382.1 YkuS family protein -
  QLQ05_RS15805 dapI 2941703..2942827 (-) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  QLQ05_RS15810 dapD 2942897..2943607 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=832720 QLQ05_RS15780 WP_003232378.1 2938218..2938793(-) (rok) [Bacillus subtilis strain KRS015]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=832720 QLQ05_RS15780 WP_003232378.1 2938218..2938793(-) (rok) [Bacillus subtilis strain KRS015]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1