Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QLQ05_RS09490 Genome accession   NZ_CP125762
Coordinates   1779619..1780422 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain KRS015     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1774619..1785422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ05_RS09470 yqxC 1774729..1775574 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  QLQ05_RS09475 argR 1775672..1776121 (+) 450 WP_003230265.1 arginine repressor ArgR -
  QLQ05_RS09480 recN 1776158..1777888 (+) 1731 WP_003230267.1 DNA repair protein RecN Machinery gene
  QLQ05_RS09485 spoIVB 1778063..1779343 (+) 1281 WP_004398697.1 SpoIVB peptidase -
  QLQ05_RS09490 spo0A 1779619..1780422 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  QLQ05_RS09495 yqiG 1780887..1782005 (-) 1119 WP_004398691.1 NADH-dependent flavin oxidoreductase -
  QLQ05_RS09500 - 1782078..1782230 (-) 153 WP_003230276.1 hypothetical protein -
  QLQ05_RS09505 yqiH 1782538..1782831 (+) 294 WP_003230284.1 lipoprotein -
  QLQ05_RS09510 yqiI 1782846..1783466 (+) 621 WP_010886565.1 N-acetylmuramoyl-L-alanine amidase -
  QLQ05_RS09515 glpQ 1783545..1784276 (+) 732 WP_003230288.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=832713 QLQ05_RS09490 WP_003226427.1 1779619..1780422(+) (spo0A) [Bacillus subtilis strain KRS015]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=832713 QLQ05_RS09490 WP_003226427.1 1779619..1780422(+) (spo0A) [Bacillus subtilis strain KRS015]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATCTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCTACCAACAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1