Detailed information NTG0832651

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QMZ13_RS03800
• Genome accession: NZ_CP125741
• Coordinates: 701597..702556 (+)
• Length: 319 a.a.
• NCBI ID: WP_042635877.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain MS2212
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 696597..707556

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMZ13_RS03770 (QMZ13_03765)	neuC	697187..698311 (+)	1125	WP_002868604.1	UDP-N-acetylglucosamine 2-epimerase	-
QMZ13_RS03775 (QMZ13_03770)	-	698304..698921 (+)	618	WP_019260375.1	glycosyltransferase	-
QMZ13_RS03780 (QMZ13_03775)	-	698918..699250 (+)	333	WP_087707738.1	hypothetical protein	-
QMZ13_RS03785 (QMZ13_03780)	-	699247..699912 (+)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
QMZ13_RS03790 (QMZ13_03785)	-	700036..700668 (+)	633	WP_042635876.1	CatB-related O-acetyltransferase	-
QMZ13_RS03795 (QMZ13_03790)	waaV	700726..701538 (-)	813	WP_002918295.1	glycosyltransferase family 2 protein	-
QMZ13_RS03800 (QMZ13_03795)	waaF	701597..702556 (+)	960	WP_042635877.1	lipopolysaccharide heptosyltransferase II	Regulator
QMZ13_RS03805 (QMZ13_03800)	gmhA	702537..703097 (-)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
QMZ13_RS03810 (QMZ13_03805)	rfaE1	703094..704479 (-)	1386	WP_042635878.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QMZ13_RS03815 (QMZ13_03810)	rfaD	704472..705425 (-)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
QMZ13_RS03820 (QMZ13_03815)	gmhB	705426..705987 (-)	562	Protein_734	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QMZ13_RS03825 (QMZ13_03820)	-	706068..706370 (+)	303	WP_002852762.1	c-type cytochrome	-
QMZ13_RS03830 (QMZ13_03825)	ccoS	706393..706599 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36698.24 Da
• Isoelectric Point: 10.3311

>NTDB_id=832651 QMZ13_RS03800 WP_042635877.1 701597..702556(+) (waaF) [Campylobacter jejuni strain MS2212]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=832651 QMZ13_RS03800 WP_042635877.1 701597..702556(+) (waaF) [Campylobacter jejuni strain MS2212]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.654	99.687	0.944