Detailed information NTG0832649

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ULK21_RS21810
• Genome accession: NZ_CP139887
• Coordinates: 4523828..4524853 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain ECO21
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4518828..4529853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ULK21_RS21790 (ULK21_21785)	metJ	4520013..4520330 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ULK21_RS21795 (ULK21_21790)	yiiX	4520390..4520998 (+)	609	WP_001523605.1	YiiX family permuted papain-like enzyme	-
ULK21_RS21800 (ULK21_21795)	rpmE	4521059..4521271 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ULK21_RS21805 (ULK21_21800)	priA	4521474..4523672 (+)	2199	WP_001334265.1	primosomal protein N'	Machinery gene
ULK21_RS21810 (ULK21_21805)	cytR	4523828..4524853 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ULK21_RS21815 (ULK21_21810)	ftsN	4524945..4525904 (+)	960	WP_000068845.1	cell division protein FtsN	-
ULK21_RS21820 (ULK21_21815)	hslV	4525997..4526527 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ULK21_RS21825 (ULK21_21820)	hslU	4526537..4527868 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ULK21_RS21830 (ULK21_21825)	menA	4527935..4528861 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ULK21_RS21835 (ULK21_21830)	rraA	4528954..4529439 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ULK21_RS21840 (ULK21_21835)	zapB	4529524..4529769 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=832649 ULK21_RS21810 WP_000644908.1 4523828..4524853(+) (cytR) [Escherichia coli strain ECO21]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=832649 ULK21_RS21810 WP_000644908.1 4523828..4524853(+) (cytR) [Escherichia coli strain ECO21]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTAATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625