Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMZ10_RS04855 | Genome accession | NZ_CP125739 |
| Coordinates | 921363..921665 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain MS2202 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 916363..926665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMZ10_RS04820 (QMZ10_04825) | - | 916776..917537 (+) | 762 | WP_002852748.1 | ATP-binding protein | - |
| QMZ10_RS04825 (QMZ10_04830) | - | 917534..918220 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| QMZ10_RS04830 (QMZ10_04835) | thiD | 918217..919029 (+) | 813 | WP_002885404.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMZ10_RS04835 (QMZ10_04840) | thiE | 919019..919651 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| QMZ10_RS04840 (QMZ10_04845) | hemD | 919629..920258 (+) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| QMZ10_RS04845 (QMZ10_04850) | - | 920255..920707 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| QMZ10_RS04850 (QMZ10_04855) | - | 920704..921366 (-) | 663 | WP_002859149.1 | hypothetical protein | - |
| QMZ10_RS04855 (QMZ10_04860) | ctsT | 921363..921665 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| QMZ10_RS04860 (QMZ10_04865) | proC | 921662..922393 (-) | 732 | WP_002885405.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMZ10_RS04865 (QMZ10_04870) | fliW | 922393..922782 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMZ10_RS04870 (QMZ10_04875) | - | 922943..923590 (+) | 648 | WP_002885144.1 | outer membrane protein assembly factor BamD | - |
| QMZ10_RS04875 (QMZ10_04880) | lon | 923607..925982 (+) | 2376 | WP_002885146.1 | endopeptidase La | - |
| QMZ10_RS04880 (QMZ10_04885) | rpsR | 926043..926303 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=832637 QMZ10_RS04855 WP_002853046.1 921363..921665(-) (ctsT) [Campylobacter jejuni strain MS2202]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=832637 QMZ10_RS04855 WP_002853046.1 921363..921665(-) (ctsT) [Campylobacter jejuni strain MS2202]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |