Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   QMZ10_RS02935 Genome accession   NZ_CP125739
Coordinates   546277..547461 (+) Length   394 a.a.
NCBI ID   WP_002780434.1    Uniprot ID   A0A0U3A9V8
Organism   Campylobacter jejuni strain MS2202     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 541277..552461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMZ10_RS02915 (QMZ10_02915) - 542347..542949 (+) 603 WP_002860377.1 gamma-glutamyl-CDP-amidate hydrolase -
  QMZ10_RS02920 (QMZ10_02920) - 542951..543712 (+) 762 WP_002875234.1 CTP:phosphoglutamine cytidylyltransferase -
  QMZ10_RS02925 (QMZ10_02925) cysC 543702..544214 (+) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  QMZ10_RS02930 (QMZ10_02930) kpsC 544211..546280 (+) 2070 WP_038401662.1 capsular polysaccharide biosynthesis protein -
  QMZ10_RS02935 (QMZ10_02935) kpsS 546277..547461 (+) 1185 WP_002780434.1 capsule polysaccharide modification protein KpsS Regulator
  QMZ10_RS02940 (QMZ10_02940) - 547534..548655 (+) 1122 WP_002890766.1 hypothetical protein -
  QMZ10_RS02945 (QMZ10_02945) - 548652..550013 (+) 1362 WP_410494893.1 cytochrome P450 -
  QMZ10_RS02950 (QMZ10_02950) - 550010..550429 (+) 420 WP_002880391.1 hypothetical protein -
  QMZ10_RS02955 (QMZ10_02955) acpS 550430..550777 (-) 348 WP_002825806.1 holo-ACP synthase -
  QMZ10_RS02960 (QMZ10_02960) fliL 550778..551314 (-) 537 WP_002855429.1 flagellar basal body-associated protein FliL -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46824.57 Da        Isoelectric Point: 9.9369

>NTDB_id=832629 QMZ10_RS02935 WP_002780434.1 546277..547461(+) (kpsS) [Campylobacter jejuni strain MS2202]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=832629 QMZ10_RS02935 WP_002780434.1 546277..547461(+) (kpsS) [Campylobacter jejuni strain MS2202]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGAGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U3A9V8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982