Detailed information NTG0832613

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: QMZ12_RS08435
• Genome accession: NZ_CP125738
• Coordinates: 1577794..1578753 (-)
• Length: 319 a.a.
• NCBI ID: WP_042635877.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain MS2217
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1572794..1583753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMZ12_RS08405 (QMZ12_08395)	ccoS	1573751..1573957 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
QMZ12_RS08410 (QMZ12_08400)	-	1573980..1574282 (-)	303	WP_002852762.1	c-type cytochrome	-
QMZ12_RS08415 (QMZ12_08405)	gmhB	1574363..1574924 (+)	562	Protein_1627	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
QMZ12_RS08420 (QMZ12_08410)	rfaD	1574925..1575878 (+)	954	WP_002859254.1	ADP-glyceromanno-heptose 6-epimerase	-
QMZ12_RS08425 (QMZ12_08415)	rfaE1	1575871..1577256 (+)	1386	WP_042635878.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
QMZ12_RS08430 (QMZ12_08420)	gmhA	1577253..1577813 (+)	561	WP_002876196.1	D-sedoheptulose 7-phosphate isomerase	-
QMZ12_RS08435 (QMZ12_08425)	waaF	1577794..1578753 (-)	960	WP_042635877.1	lipopolysaccharide heptosyltransferase II	Regulator
QMZ12_RS08440 (QMZ12_08430)	waaV	1578812..1579624 (+)	813	WP_002918295.1	glycosyltransferase family 2 protein	-
QMZ12_RS08445 (QMZ12_08435)	-	1579682..1580314 (-)	633	WP_042635876.1	CatB-related O-acetyltransferase	-
QMZ12_RS08450 (QMZ12_08440)	-	1580438..1581103 (-)	666	WP_002935341.1	cytidylyltransferase domain-containing protein	-
QMZ12_RS08455 (QMZ12_08445)	-	1581100..1582047 (-)	948	WP_042635875.1	glycosyltransferase	-
QMZ12_RS08460 (QMZ12_08450)	neuC	1582040..1583164 (-)	1125	WP_002868604.1	UDP-N-acetylglucosamine 2-epimerase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36698.24 Da
• Isoelectric Point: 10.3311

>NTDB_id=832613 QMZ12_RS08435 WP_042635877.1 1577794..1578753(-) (waaF) [Campylobacter jejuni strain MS2217]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDLSFT
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENALSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=832613 QMZ12_RS08435 WP_042635877.1 1577794..1578753(-) (waaF) [Campylobacter jejuni strain MS2217]
ATGAAAATTTTTATACATCTTCCCACTTGGCTGGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGGTAAAATCGATCTTAGCTTTACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACGCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.654	99.687	0.944