Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QMZ12_RS07175 Genome accession   NZ_CP125738
Coordinates   1337522..1338490 (-) Length   322 a.a.
NCBI ID   WP_002872671.1    Uniprot ID   Q0P8Q7
Organism   Campylobacter jejuni strain MS2217     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1332522..1343490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMZ12_RS07150 (QMZ12_07140) - 1334054..1334608 (+) 555 WP_002867306.1 membrane protein -
  QMZ12_RS07160 (QMZ12_07150) ceuB 1334834..1335826 (-) 993 WP_002867307.1 enterochelin ABC transporter substrate-binding protein CeuB -
  QMZ12_RS07165 (QMZ12_07155) ceuD 1335839..1336594 (-) 756 WP_002867308.1 ABC transporter ATP-binding protein -
  QMZ12_RS07170 (QMZ12_07160) ceuC 1336591..1337529 (-) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  QMZ12_RS07175 (QMZ12_07165) ceuB 1337522..1338490 (-) 969 WP_002872671.1 ABC transporter permease Machinery gene
  QMZ12_RS07180 (QMZ12_07170) pldA 1338576..1339565 (-) 990 WP_002864239.1 phospholipase A -
  QMZ12_RS07185 (QMZ12_07175) mobA 1339562..1340137 (-) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  QMZ12_RS07190 (QMZ12_07180) - 1340199..1341506 (+) 1308 WP_002864240.1 NFACT RNA binding domain-containing protein -
  QMZ12_RS07195 (QMZ12_07185) - 1341508..1341846 (+) 339 WP_002852397.1 hypothetical protein -
  QMZ12_RS07200 (QMZ12_07190) cdsA 1341855..1342580 (+) 726 WP_002889945.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35469.40 Da        Isoelectric Point: 9.6678

>NTDB_id=832608 QMZ12_RS07175 WP_002872671.1 1337522..1338490(-) (ceuB) [Campylobacter jejuni strain MS2217]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=832608 QMZ12_RS07175 WP_002872671.1 1337522..1338490(-) (ceuB) [Campylobacter jejuni strain MS2217]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGCATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991