Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   U0320_RS13925 Genome accession   NZ_CP139868
Coordinates   2771539..2772342 (+) Length   267 a.a.
NCBI ID   WP_001134197.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GP11     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2766539..2777342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0320_RS13905 (U0320_13875) - 2768085..2769422 (+) 1338 WP_000812832.1 aminotransferase class V-fold PLP-dependent enzyme -
  U0320_RS13910 (U0320_13880) tmk 2769424..2770041 (+) 618 WP_001272126.1 dTMP kinase -
  U0320_RS13915 (U0320_13885) - 2770069..2770398 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  U0320_RS13920 (U0320_13890) - 2770612..2771538 (+) 927 WP_000344336.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  U0320_RS13925 (U0320_13895) yaaT 2771539..2772342 (+) 804 WP_001134197.1 PSP1 domain-containing protein Regulator
  U0320_RS13930 (U0320_13900) yabA 2772359..2772706 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  U0320_RS13935 (U0320_13905) - 2772980..2773705 (+) 726 WP_000910696.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  U0320_RS13940 (U0320_13910) - 2773698..2773946 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  U0320_RS13945 (U0320_13915) rsmI 2773948..2774787 (+) 840 WP_000279917.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  U0320_RS13950 (U0320_13920) metG 2775072..2777045 (+) 1974 WP_049317347.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30218.86 Da        Isoelectric Point: 4.5801

>NTDB_id=832579 U0320_RS13925 WP_001134197.1 2771539..2772342(+) (yaaT) [Staphylococcus aureus strain GP11]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=832579 U0320_RS13925 WP_001134197.1 2771539..2772342(+) (yaaT) [Staphylococcus aureus strain GP11]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

62.738

98.502

0.618