Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   U0320_RS11855 Genome accession   NZ_CP139868
Coordinates   2329549..2330349 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain GP11     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2324549..2335349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U0320_RS11840 (U0320_11815) walK 2325211..2327037 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  U0320_RS11845 (U0320_11820) yycH 2327030..2328364 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  U0320_RS11850 (U0320_11825) - 2328365..2329153 (+) 789 WP_045177892.1 two-component system regulatory protein YycI -
  U0320_RS11855 (U0320_11830) vicX 2329549..2330349 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  U0320_RS11860 (U0320_11835) adsA 2330576..2332894 (+) 2319 WP_045177895.1 LPXTG-anchored adenosine synthase AdsA -
  U0320_RS11865 (U0320_11840) rlmH 2333261..2333740 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  U0320_RS11870 (U0320_11845) - 2333793..2334599 (+) 807 WP_322407834.1 ATP-binding protein -
  U0320_RS11875 (U0320_11850) - 2334659..2335171 (+) 513 WP_322407835.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=832575 U0320_RS11855 WP_000088649.1 2329549..2330349(+) (vicX) [Staphylococcus aureus strain GP11]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=832575 U0320_RS11855 WP_000088649.1 2329549..2330349(+) (vicX) [Staphylococcus aureus strain GP11]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGATGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474