Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QMZ11_RS01830 Genome accession   NZ_CP125737
Coordinates   340700..341668 (-) Length   322 a.a.
NCBI ID   WP_020247096.1    Uniprot ID   -
Organism   Campylobacter jejuni strain MS2191     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 335700..346668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMZ11_RS01805 (QMZ11_01800) - 337232..337786 (+) 555 WP_002884169.1 membrane protein -
  QMZ11_RS01815 (QMZ11_01810) ceuB 338012..339004 (-) 993 WP_002884171.1 enterochelin ABC transporter substrate-binding protein CeuB -
  QMZ11_RS01820 (QMZ11_01815) ceuD 339017..339772 (-) 756 WP_002884173.1 ABC transporter ATP-binding protein -
  QMZ11_RS01825 (QMZ11_01820) ceuC 339769..340707 (-) 939 WP_002884174.1 iron chelate uptake ABC transporter family permease subunit -
  QMZ11_RS01830 (QMZ11_01825) ceuB 340700..341668 (-) 969 WP_020247096.1 ABC transporter permease Machinery gene
  QMZ11_RS01835 (QMZ11_01830) pldA 341754..342743 (-) 990 WP_002860788.1 phospholipase A -
  QMZ11_RS01840 (QMZ11_01835) mobA 342740..343315 (-) 576 WP_002884175.1 molybdenum cofactor guanylyltransferase -
  QMZ11_RS01845 (QMZ11_01840) - 343377..344684 (+) 1308 WP_002888101.1 NFACT RNA binding domain-containing protein -
  QMZ11_RS01850 (QMZ11_01845) - 344686..345024 (+) 339 WP_002852397.1 hypothetical protein -
  QMZ11_RS01855 (QMZ11_01850) cdsA 345033..345758 (+) 726 WP_002888102.1 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35411.32 Da        Isoelectric Point: 9.6678

>NTDB_id=832573 QMZ11_RS01830 WP_020247096.1 340700..341668(-) (ceuB) [Campylobacter jejuni strain MS2191]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=832573 QMZ11_RS01830 WP_020247096.1 340700..341668(-) (ceuB) [Campylobacter jejuni strain MS2191]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997