Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QMA40_RS05930 Genome accession   NZ_CP125661
Coordinates   1136513..1136689 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain BV5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1131513..1141689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMA40_RS05910 (QMA40_05885) clpC 1131843..1134443 (+) 2601 WP_000365398.1 ATP-dependent chaperone ClpB Regulator
  QMA40_RS05915 (QMA40_05890) - 1134483..1134665 (-) 183 WP_001211116.1 YjzD family protein -
  QMA40_RS05920 (QMA40_05895) - 1134822..1135556 (+) 735 WP_000028714.1 hydrolase -
  QMA40_RS05925 (QMA40_05900) - 1135586..1136458 (+) 873 WP_001986101.1 NAD-dependent epimerase/dehydratase family protein -
  QMA40_RS05930 (QMA40_05905) comZ 1136513..1136689 (+) 177 WP_001986215.1 ComZ family protein Regulator
  QMA40_RS05935 (QMA40_05910) fabH 1137226..1138158 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  QMA40_RS05940 (QMA40_05915) fabF 1138190..1139428 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  QMA40_RS05945 (QMA40_05920) - 1139535..1140323 (+) 789 WP_000513275.1 DUF2268 domain-containing protein -
  QMA40_RS05950 (QMA40_05925) - 1140467..1141213 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=832290 QMA40_RS05930 WP_001986215.1 1136513..1136689(+) (comZ) [Bacillus thuringiensis strain BV5]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=832290 QMA40_RS05930 WP_001986215.1 1136513..1136689(+) (comZ) [Bacillus thuringiensis strain BV5]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCTTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586