Detailed information NTG0832097

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QLH33_RS16750
• Genome accession: NZ_CP125654
• Coordinates: 3395168..3396331 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain TS5
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3390168..3401331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLH33_RS16720 (QLH33_16720)	-	3390432..3390851 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
QLH33_RS16725 (QLH33_16725)	comFC	3390925..3391614 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
QLH33_RS16730 (QLH33_16730)	-	3391620..3391904 (-)	285	WP_003151389.1	competence protein ComFB	-
QLH33_RS16735 (QLH33_16735)	comFA	3391962..3393347 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
QLH33_RS16740 (QLH33_16740)	-	3393456..3394304 (-)	849	WP_032876160.1	DegV family protein	-
QLH33_RS16745 (QLH33_16745)	degU	3394402..3395091 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QLH33_RS16750 (QLH33_16750)	degS	3395168..3396331 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QLH33_RS16755 (QLH33_16755)	-	3396554..3397201 (+)	648	WP_007614107.1	YigZ family protein	-
QLH33_RS16760 (QLH33_16760)	-	3397206..3398387 (+)	1182	WP_032876157.1	LCP family protein	-
QLH33_RS16765 (QLH33_16765)	-	3398486..3399562 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QLH33_RS16770 (QLH33_16770)	-	3399695..3400891 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=832097 QLH33_RS16750 WP_007407484.1 3395168..3396331(-) (degS) [Bacillus velezensis strain TS5]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=832097 QLH33_RS16750 WP_007407484.1 3395168..3396331(-) (degS) [Bacillus velezensis strain TS5]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951