Detailed information NTG0083208

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: R8615_RS09320
• Genome accession: NZ_AP026929
• Coordinates: 1818613..1819512 (-)
• Length: 299 a.a.
• NCBI ID: WP_024477664.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900701114
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1813613..1824512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8615_RS09295 (PC1101_18300)	rsmA	1813838..1814710 (-)	873	WP_001216852.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
R8615_RS09300 (PC1101_18310)	-	1814961..1815254 (-)	294	WP_000333255.1	hypothetical protein	-
R8615_RS09305 (PC1101_18320)	-	1815247..1815888 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
R8615_RS09310 (PC1101_18330)	-	1815890..1817920 (-)	2031	WP_024477663.1	bacteriocin-associated integral membrane family protein	-
R8615_RS09315 (PC1101_18340)	-	1817997..1818293 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
R8615_RS09320 (PC1101_18350)	comR	1818613..1819512 (-)	900	WP_024477664.1	helix-turn-helix transcriptional regulator	Regulator
R8615_RS09325 (PC1101_18360)	rnmV	1819584..1820144 (-)	561	WP_024477665.1	ribonuclease M5	-
R8615_RS09330 (PC1101_18370)	-	1820144..1820917 (-)	774	WP_024477666.1	TatD family hydrolase	-
R8615_RS09335 (PC1101_18380)	-	1821222..1821941 (-)	720	Protein_1828	DUF1542 domain-containing protein	-
R8615_RS09340 (PC1101_18390)	rpmH	1822150..1822284 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
R8615_RS09345 (PC1101_18400)	-	1822429..1823643 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
R8615_RS09350 (PC1101_18410)	-	1823799..1824092 (-)	294	WP_000977366.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35337.14 Da
• Isoelectric Point: 4.9064

>NTDB_id=83208 R8615_RS09320 WP_024477664.1 1818613..1819512(-) (comR) [Streptococcus pneumoniae strain PZ900701114]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=83208 R8615_RS09320 WP_024477664.1 1818613..1819512(-) (comR) [Streptococcus pneumoniae strain PZ900701114]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus mutans UA159	37.415	98.328	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361