Detailed information NTG0831958

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U0530_RS03135
• Genome accession: NZ_CP139853
• Coordinates: 644812..645795 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain Nord122
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 639812..650795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0530_RS03110 (U0530_03105)	-	640960..641067 (-)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0530_RS03115 (U0530_03110)	-	641443..641550 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0530_RS03120 (U0530_03115)	-	641927..642034 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0530_RS03125 (U0530_03120)	yhjV	642510..643781 (+)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
U0530_RS03130 (U0530_03125)	dppF	643811..644815 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U0530_RS03135 (U0530_03130)	amiE	644812..645795 (-)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
U0530_RS03140 (U0530_03135)	dppC	645806..646708 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U0530_RS03145 (U0530_03140)	dppB	646718..647737 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
U0530_RS03150 (U0530_03145)	dppA	647888..649495 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=831958 U0530_RS03135 WP_001196487.1 644812..645795(-) (amiE) [Escherichia coli strain Nord122]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=831958 U0530_RS03135 WP_001196487.1 644812..645795(-) (amiE) [Escherichia coli strain Nord122]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407