Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QFW87_RS27620 Genome accession   NZ_CP125618
Coordinates   6016705..6017109 (-) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas sp. PMCC200344     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6011705..6022109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFW87_RS27605 - 6013520..6015577 (-) 2058 WP_283189329.1 methyl-accepting chemotaxis protein -
  QFW87_RS27610 - 6015723..6016271 (-) 549 WP_283189330.1 chemotaxis protein CheW -
  QFW87_RS27615 pilH 6016282..6016647 (-) 366 WP_008068134.1 twitching motility response regulator PilH -
  QFW87_RS27620 pilG 6016705..6017109 (-) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  QFW87_RS27625 gshB 6017344..6018297 (+) 954 WP_140675026.1 glutathione synthase -
  QFW87_RS27630 - 6018375..6019274 (+) 900 WP_283182025.1 energy transducer TonB -
  QFW87_RS27635 - 6019587..6020516 (+) 930 WP_283180508.1 transposase -
  QFW87_RS27640 - 6020700..6021272 (+) 573 WP_046045231.1 YqgE/AlgH family protein -
  QFW87_RS27645 ruvX 6021272..6021709 (+) 438 WP_005792259.1 Holliday junction resolvase RuvX -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=831932 QFW87_RS27620 WP_008152601.1 6016705..6017109(-) (pilG) [Pseudomonas sp. PMCC200344]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=831932 QFW87_RS27620 WP_008152601.1 6016705..6017109(-) (pilG) [Pseudomonas sp. PMCC200344]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGACTCGAAGACGATTCGCCGTACCGCCGAAACGCTGTT
GAAGAACGTGGGGTGTGAAGTGATCACCGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGATAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGATGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTTAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709