Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMK12_RS05050 | Genome accession | NZ_CP125395 |
| Coordinates | 993216..993518 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain SKBC94 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 988216..998518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK12_RS05025 (QMK12_05025) | rpsR | 988578..988838 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| QMK12_RS05030 (QMK12_05030) | lon | 988899..991274 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| QMK12_RS05035 (QMK12_05035) | - | 991291..991938 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| QMK12_RS05040 (QMK12_05040) | fliW | 992099..992488 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMK12_RS05045 (QMK12_05045) | proC | 992488..993219 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMK12_RS05050 (QMK12_05050) | ctsT | 993216..993518 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| QMK12_RS05055 (QMK12_05055) | - | 993515..994177 (+) | 663 | WP_134239833.1 | hypothetical protein | - |
| QMK12_RS05060 (QMK12_05060) | - | 994174..994626 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| QMK12_RS05065 (QMK12_05065) | hemD | 994623..995252 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| QMK12_RS05070 (QMK12_05070) | thiE | 995230..995862 (-) | 633 | WP_057042821.1 | thiamine phosphate synthase | - |
| QMK12_RS05075 (QMK12_05075) | thiD | 995852..996664 (-) | 813 | WP_283155396.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMK12_RS05080 (QMK12_05080) | - | 996661..997347 (-) | 687 | WP_134224621.1 | endonuclease III domain-containing protein | - |
| QMK12_RS05085 (QMK12_05085) | - | 997344..998105 (-) | 762 | WP_134224620.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=831865 QMK12_RS05050 WP_002855822.1 993216..993518(+) (ctsT) [Campylobacter jejuni strain SKBC94]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=831865 QMK12_RS05050 WP_002855822.1 993216..993518(+) (ctsT) [Campylobacter jejuni strain SKBC94]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |