Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMK13_RS05270 | Genome accession | NZ_CP125390 |
| Coordinates | 1027927..1028229 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain SKBC9 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1022927..1033229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK13_RS05245 (QMK13_05245) | rpsR | 1023290..1023550 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QMK13_RS05250 (QMK13_05250) | lon | 1023610..1025985 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| QMK13_RS05255 (QMK13_05255) | - | 1026002..1026649 (-) | 648 | WP_002936691.1 | outer membrane protein assembly factor BamD | - |
| QMK13_RS05260 (QMK13_05260) | fliW | 1026810..1027199 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMK13_RS05265 (QMK13_05265) | proC | 1027199..1027930 (+) | 732 | WP_052777969.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMK13_RS05270 (QMK13_05270) | ctsT | 1027927..1028229 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| QMK13_RS05275 (QMK13_05275) | - | 1028226..1028888 (+) | 663 | WP_057100537.1 | hypothetical protein | - |
| QMK13_RS05280 (QMK13_05280) | - | 1028885..1029337 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| QMK13_RS05285 (QMK13_05285) | hemD | 1029334..1029963 (-) | 630 | WP_052833981.1 | uroporphyrinogen-III synthase | - |
| QMK13_RS05290 (QMK13_05290) | thiE | 1029941..1030573 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| QMK13_RS05295 (QMK13_05295) | thiD | 1030563..1031375 (-) | 813 | WP_002894307.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMK13_RS05300 (QMK13_05300) | - | 1031372..1032058 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| QMK13_RS05305 (QMK13_05305) | - | 1032055..1032816 (-) | 762 | WP_057100536.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=831837 QMK13_RS05270 WP_002855822.1 1027927..1028229(+) (ctsT) [Campylobacter jejuni strain SKBC9]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=831837 QMK13_RS05270 WP_002855822.1 1027927..1028229(+) (ctsT) [Campylobacter jejuni strain SKBC9]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCCATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCCATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |