Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMK10_RS05645 | Genome accession | NZ_CP125388 |
| Coordinates | 1090479..1090781 (+) | Length | 100 a.a. |
| NCBI ID | WP_057042823.1 | Uniprot ID | A0A5Y7GJZ7 |
| Organism | Campylobacter jejuni strain SKBC25 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1085479..1095781
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK10_RS05620 (QMK10_05620) | rpsR | 1085841..1086101 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| QMK10_RS05625 (QMK10_05625) | lon | 1086162..1088537 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| QMK10_RS05630 (QMK10_05630) | - | 1088554..1089201 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| QMK10_RS05635 (QMK10_05635) | fliW | 1089362..1089751 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMK10_RS05640 (QMK10_05640) | proC | 1089751..1090482 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMK10_RS05645 (QMK10_05645) | ctsT | 1090479..1090781 (+) | 303 | WP_057042823.1 | hypothetical protein | Machinery gene |
| QMK10_RS05650 (QMK10_05650) | - | 1090778..1091440 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| QMK10_RS05655 (QMK10_05655) | - | 1091437..1091889 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| QMK10_RS05660 (QMK10_05660) | hemD | 1091886..1092515 (-) | 630 | WP_283151578.1 | uroporphyrinogen-III synthase | - |
| QMK10_RS05665 (QMK10_05665) | thiE | 1092493..1093125 (-) | 633 | WP_002864256.1 | thiamine phosphate synthase | - |
| QMK10_RS05670 (QMK10_05670) | thiD | 1093115..1093927 (-) | 813 | WP_283151579.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMK10_RS05675 (QMK10_05675) | - | 1093924..1094610 (-) | 687 | WP_002894310.1 | endonuclease III domain-containing protein | - |
| QMK10_RS05680 (QMK10_05680) | - | 1094607..1095368 (-) | 762 | WP_283151580.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12163.30 Da Isoelectric Point: 9.0653
>NTDB_id=831810 QMK10_RS05645 WP_057042823.1 1090479..1090781(+) (ctsT) [Campylobacter jejuni strain SKBC25]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
Nucleotide
Download Length: 303 bp
>NTDB_id=831810 QMK10_RS05645 WP_057042823.1 1090479..1090781(+) (ctsT) [Campylobacter jejuni strain SKBC25]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |