Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   QMK14_RS06870 Genome accession   NZ_CP125387
Coordinates   1364133..1365317 (-) Length   394 a.a.
NCBI ID   WP_052802074.1    Uniprot ID   A0A5T0QG45
Organism   Campylobacter jejuni strain SKBC102     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1359133..1370317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMK14_RS06845 (QMK14_06845) fliL 1360282..1360818 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  QMK14_RS06850 (QMK14_06850) acpS 1360818..1361165 (+) 348 WP_002825806.1 holo-ACP synthase -
  QMK14_RS06855 (QMK14_06855) - 1361166..1361585 (-) 420 WP_002880391.1 hypothetical protein -
  QMK14_RS06860 (QMK14_06860) - 1361582..1362943 (-) 1362 WP_014517093.1 cytochrome P450 -
  QMK14_RS06865 (QMK14_06865) - 1362940..1364061 (-) 1122 WP_057042690.1 hypothetical protein -
  QMK14_RS06870 (QMK14_06870) kpsS 1364133..1365317 (-) 1185 WP_052802074.1 capsule polysaccharide modification protein KpsS Regulator
  QMK14_RS06875 (QMK14_06875) kpsC 1365314..1367383 (-) 2070 WP_052802071.1 capsular polysaccharide biosynthesis protein -
  QMK14_RS06880 (QMK14_06880) - 1367461..1368714 (-) 1254 WP_052802069.1 cation:proton antiporter -
  QMK14_RS06885 (QMK14_06885) - 1368724..1369683 (-) 960 WP_052802067.1 pyruvate kinase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46800.59 Da        Isoelectric Point: 9.9368

>NTDB_id=831792 QMK14_RS06870 WP_052802074.1 1364133..1365317(-) (kpsS) [Campylobacter jejuni strain SKBC102]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGVEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=831792 QMK14_RS06870 WP_052802074.1 1364133..1365317(-) (kpsS) [Campylobacter jejuni strain SKBC102]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCACCTTCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAGTTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACTAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCCTTTTTGTATTGGTTATTTGCTTTTATTTTGGCCCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATACAGAAAATATCTTTACAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAGAAGCTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGTATGTAATTTTAAGA
AATACCTTTTACAAACTAATCAATTCAACGGCAATTTTTACAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0QG45

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.462

100

0.975