Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMK14_RS05240 | Genome accession | NZ_CP125387 |
| Coordinates | 1035441..1035743 (+) | Length | 100 a.a. |
| NCBI ID | WP_057042823.1 | Uniprot ID | A0A5Y7GJZ7 |
| Organism | Campylobacter jejuni strain SKBC102 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1030441..1040743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK14_RS05215 (QMK14_05215) | rpsR | 1030803..1031063 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| QMK14_RS05220 (QMK14_05220) | lon | 1031124..1033499 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| QMK14_RS05225 (QMK14_05225) | - | 1033516..1034163 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| QMK14_RS05230 (QMK14_05230) | fliW | 1034324..1034713 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMK14_RS05235 (QMK14_05235) | proC | 1034713..1035444 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMK14_RS05240 (QMK14_05240) | ctsT | 1035441..1035743 (+) | 303 | WP_057042823.1 | hypothetical protein | Machinery gene |
| QMK14_RS05245 (QMK14_05245) | - | 1035740..1036402 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| QMK14_RS05250 (QMK14_05250) | - | 1036399..1036851 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| QMK14_RS05255 (QMK14_05255) | hemD | 1036848..1037477 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| QMK14_RS05260 (QMK14_05260) | thiE | 1037455..1038087 (-) | 633 | WP_057042821.1 | thiamine phosphate synthase | - |
| QMK14_RS05265 (QMK14_05265) | thiD | 1038077..1038889 (-) | 813 | WP_002864255.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMK14_RS05270 (QMK14_05270) | - | 1038886..1039572 (-) | 687 | WP_038817202.1 | endonuclease III domain-containing protein | - |
| QMK14_RS05275 (QMK14_05275) | - | 1039569..1040331 (-) | 763 | Protein_1020 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12163.30 Da Isoelectric Point: 9.0653
>NTDB_id=831783 QMK14_RS05240 WP_057042823.1 1035441..1035743(+) (ctsT) [Campylobacter jejuni strain SKBC102]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIILQEQFVNDG
IFQFQKLYFQDQNYSVYFKK
Nucleotide
Download Length: 303 bp
>NTDB_id=831783 QMK14_RS05240 WP_057042823.1 1035441..1035743(+) (ctsT) [Campylobacter jejuni strain SKBC102]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAATTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |