Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | QMK09_RS05735 | Genome accession | NZ_CP125383 |
| Coordinates | 1086016..1086318 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain SKBC1 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1081016..1091318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMK09_RS05710 (QMK09_05710) | rpsR | 1081378..1081638 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| QMK09_RS05715 (QMK09_05715) | lon | 1081699..1084074 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| QMK09_RS05720 (QMK09_05720) | - | 1084091..1084738 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| QMK09_RS05725 (QMK09_05725) | fliW | 1084899..1085288 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| QMK09_RS05730 (QMK09_05730) | proC | 1085288..1086019 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| QMK09_RS05735 (QMK09_05735) | ctsT | 1086016..1086318 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| QMK09_RS05740 (QMK09_05740) | - | 1086315..1086977 (+) | 663 | WP_057036688.1 | hypothetical protein | - |
| QMK09_RS05745 (QMK09_05745) | - | 1086974..1087426 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| QMK09_RS05750 (QMK09_05750) | hemD | 1087423..1088052 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| QMK09_RS05755 (QMK09_05755) | thiE | 1088030..1088662 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| QMK09_RS05760 (QMK09_05760) | thiD | 1088652..1089464 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QMK09_RS05765 (QMK09_05765) | - | 1089461..1090147 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| QMK09_RS05770 (QMK09_05770) | - | 1090144..1090905 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=831729 QMK09_RS05735 WP_002853046.1 1086016..1086318(+) (ctsT) [Campylobacter jejuni strain SKBC1]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=831729 QMK09_RS05735 WP_002853046.1 1086016..1086318(+) (ctsT) [Campylobacter jejuni strain SKBC1]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |