Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QMK55_RS11390 Genome accession   NZ_CP125378
Coordinates   2514531..2514935 (-) Length   134 a.a.
NCBI ID   WP_007913673.1    Uniprot ID   -
Organism   Pseudomonas sp. P8_229     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2509531..2519935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMK55_RS11375 (QMK55_11370) - 2511445..2513499 (-) 2055 WP_320329202.1 methyl-accepting chemotaxis protein -
  QMK55_RS11380 (QMK55_11375) - 2513555..2514094 (-) 540 WP_320329203.1 chemotaxis protein CheW -
  QMK55_RS11385 (QMK55_11380) pilH 2514105..2514470 (-) 366 WP_025109154.1 twitching motility response regulator PilH -
  QMK55_RS11390 (QMK55_11385) pilG 2514531..2514935 (-) 405 WP_007913673.1 twitching motility response regulator PilG Regulator
  QMK55_RS11395 (QMK55_11390) gshB 2515161..2516132 (+) 972 WP_320329204.1 glutathione synthase -
  QMK55_RS11400 (QMK55_11395) - 2516240..2517139 (+) 900 WP_320329205.1 energy transducer TonB -
  QMK55_RS11405 (QMK55_11400) - 2517380..2517952 (+) 573 WP_102358365.1 YqgE/AlgH family protein -
  QMK55_RS11410 (QMK55_11405) ruvX 2517952..2518389 (+) 438 WP_003229101.1 Holliday junction resolvase RuvX -
  QMK55_RS11415 (QMK55_11410) pyrR 2518470..2518976 (+) 507 WP_102358364.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14592.99 Da        Isoelectric Point: 7.1346

>NTDB_id=831621 QMK55_RS11390 WP_007913673.1 2514531..2514935(-) (pilG) [Pseudomonas sp. P8_229]
MEQQSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=831621 QMK55_RS11390 WP_007913673.1 2514531..2514935(-) (pilG) [Pseudomonas sp. P8_229]
ATGGAACAGCAGTCCAGCGCCTTGAAGGTCATGGTGATCGATGACTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAGAATGTGGGCTGCGAGGTCATCACGGCCATCGACGGTTTCGATGCGTTGGCCAAGATCGCCGACAACCACCCCGGAA
TCATTTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
GCCACGCCGGTGATCATGCTGTCGTCGCGCGACGGGCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTCAACGCGATTCAGGCCCACGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

93.284

0.701