Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QMK52_RS09060 Genome accession   NZ_CP125376
Coordinates   2055276..2055683 (+) Length   135 a.a.
NCBI ID   WP_005792254.1    Uniprot ID   A0A7S7MTU1
Organism   Pseudomonas sp. P9_2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2050276..2060683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMK52_RS09030 (QMK52_09030) - 2050375..2051379 (-) 1005 WP_005792261.1 aspartate carbamoyltransferase catalytic subunit -
  QMK52_RS09035 (QMK52_09035) pyrR 2051404..2051910 (-) 507 WP_005792260.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  QMK52_RS09040 (QMK52_09040) ruvX 2052043..2052480 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  QMK52_RS09045 (QMK52_09045) - 2052480..2053049 (-) 570 WP_005792257.1 YqgE/AlgH family protein -
  QMK52_RS09050 (QMK52_09050) - 2053100..2054005 (-) 906 WP_122735896.1 energy transducer TonB -
  QMK52_RS09055 (QMK52_09055) gshB 2054083..2055036 (-) 954 WP_320404023.1 glutathione synthase -
  QMK52_RS09060 (QMK52_09060) pilG 2055276..2055683 (+) 408 WP_005792254.1 twitching motility response regulator PilG Regulator
  QMK52_RS09065 (QMK52_09065) pilH 2055730..2056095 (+) 366 WP_003234583.1 twitching motility response regulator PilH -
  QMK52_RS09070 (QMK52_09070) - 2056108..2056632 (+) 525 WP_005792252.1 chemotaxis protein CheW -
  QMK52_RS09075 (QMK52_09075) - 2056629..2058680 (+) 2052 WP_005792250.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14978.53 Da        Isoelectric Point: 7.3845

>NTDB_id=831567 QMK52_RS09060 WP_005792254.1 2055276..2055683(+) (pilG) [Pseudomonas sp. P9_2]
MEQHSNALRVMVIDDSKTIRRTAETLLKNMGCEVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
AIPVIMLSSRDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPAFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=831567 QMK52_RS09060 WP_005792254.1 2055276..2055683(+) (pilG) [Pseudomonas sp. P9_2]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACACTGTT
GAAGAACATGGGGTGCGAGGTCATCACCGCCATCGACGGTTTCGATGCCCTGGCGCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
GCGATCCCGGTGATCATGTTGTCCTCCAGGGATGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTGGGTGTCGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGTGCGATCAAGGCCTATGTGCCTGCCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7S7MTU1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.291

94.074

0.652