Detailed information NTG0831533

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U0546_RS21995
• Genome accession: NZ_CP139794
• Coordinates: 4472382..4473365 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain Nord8
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4467382..4478365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0546_RS21980 (U0546_21980)	dppA	4468526..4470133 (+)	1608	WP_322418601.1	dipeptide ABC transporter substrate-binding protein DppA	-
U0546_RS21985 (U0546_21985)	dppB	4470440..4471459 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
U0546_RS21990 (U0546_21990)	dppC	4471469..4472371 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U0546_RS21995 (U0546_21995)	amiE	4472382..4473365 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
U0546_RS22000 (U0546_22000)	dppF	4473362..4474366 (+)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U0546_RS22005 (U0546_22005)	yhjV	4474396..4475667 (-)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
U0546_RS22010 (U0546_22010)	-	4476143..4476250 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0546_RS22015 (U0546_22015)	-	4476626..4476733 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
U0546_RS22020 (U0546_22020)	-	4477109..4477216 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=831533 U0546_RS21995 WP_001196477.1 4472382..4473365(+) (amiE) [Escherichia coli strain Nord8]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=831533 U0546_RS21995 WP_001196477.1 4472382..4473365(+) (amiE) [Escherichia coli strain Nord8]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404