Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QMK51_RS02100 Genome accession   NZ_CP125375
Coordinates   460202..460606 (+) Length   134 a.a.
NCBI ID   WP_038980984.1    Uniprot ID   A0A9X1BKU0
Organism   Pseudomonas sp. P9_31     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 455202..465606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMK51_RS02070 (QMK51_02070) - 455215..456219 (-) 1005 WP_007897943.1 aspartate carbamoyltransferase catalytic subunit -
  QMK51_RS02075 (QMK51_02075) pyrR 456247..456750 (-) 504 WP_258698654.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  QMK51_RS02080 (QMK51_02080) ruvX 456840..457286 (-) 447 WP_018928712.1 Holliday junction resolvase RuvX -
  QMK51_RS02085 (QMK51_02085) - 457286..457858 (-) 573 WP_258698655.1 YqgE/AlgH family protein -
  QMK51_RS02090 (QMK51_02090) - 458038..458937 (-) 900 WP_320393027.1 energy transducer TonB -
  QMK51_RS02095 (QMK51_02095) gshB 459015..459968 (-) 954 WP_258698657.1 glutathione synthase -
  QMK51_RS02100 (QMK51_02100) pilG 460202..460606 (+) 405 WP_038980984.1 twitching motility response regulator PilG Regulator
  QMK51_RS02105 (QMK51_02105) pilH 460664..461029 (+) 366 WP_007897961.1 twitching motility response regulator PilH -
  QMK51_RS02110 (QMK51_02110) - 461040..461594 (+) 555 WP_320393028.1 chemotaxis protein CheW -
  QMK51_RS02115 (QMK51_02115) - 461641..463698 (+) 2058 WP_320393029.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14563.91 Da        Isoelectric Point: 7.2441

>NTDB_id=831530 QMK51_RS02100 WP_038980984.1 460202..460606(+) (pilG) [Pseudomonas sp. P9_31]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVSPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=831530 QMK51_RS02100 WP_038980984.1 460202..460606(+) (pilG) [Pseudomonas sp. P9_31]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGTT
GAAAAATGTGGGCTGTGAAGTCATCACTGCAATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGACAATCACCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGTTGTTCGACAAGGCCAAAGGCCGGATCGTCGGTTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATTCAGGCCCACGTACCGGGCTTCGCCGCCGTTTCGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709