Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   HX0037_RS09065 Genome accession   NZ_CP139782
Coordinates   1903815..1904642 (-) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain HX0037     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1898815..1909642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HX0037_RS09040 abrB 1901155..1901445 (+) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator
  HX0037_RS09045 rsmI 1901495..1902376 (-) 882 WP_017419497.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  HX0037_RS09050 - 1902351..1902650 (-) 300 WP_007409921.1 GIY-YIG nuclease family protein -
  HX0037_RS09055 - 1902637..1903380 (-) 744 WP_004264717.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  HX0037_RS09060 yabA 1903441..1903800 (-) 360 WP_004264720.1 replication initiation-control protein YabA -
  HX0037_RS09065 yaaT 1903815..1904642 (-) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  HX0037_RS09070 holB 1904645..1905634 (-) 990 WP_007409919.1 DNA polymerase III subunit delta' -
  HX0037_RS09075 - 1905646..1906086 (-) 441 WP_004264730.1 YaaR family protein -
  HX0037_RS09080 darA 1906099..1906428 (-) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  HX0037_RS09085 tmk 1906499..1907137 (-) 639 WP_025650336.1 dTMP kinase -
  HX0037_RS09090 - 1907134..1908567 (-) 1434 WP_025650335.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=831393 HX0037_RS09065 WP_004264723.1 1903815..1904642(-) (yaaT) [Bacillus amyloliquefaciens strain HX0037]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=831393 HX0037_RS09065 WP_004264723.1 1903815..1904642(-) (yaaT) [Bacillus amyloliquefaciens strain HX0037]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGAAAAATTTATTATTTTGATCCGAATGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAGTT
TACATTTGACCGCAATAAAGTCATTTTTTACTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967