Detailed information NTG0831346

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: HX0037_RS03095
• Genome accession: NZ_CP139782
• Coordinates: 754997..756133 (-)
• Length: 378 a.a.
• NCBI ID: WP_330538058.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HX0037
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 749997..761133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HX0037_RS03055	-	750236..751063 (-)	828	WP_094247027.1	FaeA/PapI family transcriptional regulator	-
HX0037_RS03060	-	751053..751232 (-)	180	WP_033574556.1	hypothetical protein	-
HX0037_RS03065	xre	751424..751762 (+)	339	WP_003154871.1	HTH-type transcriptional regulator Xre	-
HX0037_RS03070	-	751911..752501 (+)	591	WP_003154873.1	ImmA/IrrE family metallo-endopeptidase	-
HX0037_RS03075	-	752655..753260 (-)	606	WP_094247028.1	poly-gamma-glutamate hydrolase family protein	-
HX0037_RS03080	-	753369..753746 (+)	378	WP_007610770.1	PH domain-containing protein	-
HX0037_RS03085	-	753778..754731 (-)	954	WP_003154880.1	N-acetylmuramoyl-L-alanine amidase	-
HX0037_RS03090	-	754873..755007 (-)	135	WP_003154881.1	PhrA family phosphatase inhibitor	-
HX0037_RS03095	rapC	754997..756133 (-)	1137	WP_330538058.1	Rap family tetratricopeptide repeat protein	Regulator
HX0037_RS03100	-	756338..756805 (+)	468	WP_025851837.1	DinB family protein	-
HX0037_RS03105	-	756954..757718 (+)	765	WP_015388360.1	sulfite exporter TauE/SafE family protein	-
HX0037_RS03110	-	757752..759245 (-)	1494	WP_094247029.1	UxaA family hydrolase	-
HX0037_RS03115	-	759242..760687 (-)	1446	WP_094247030.1	tagaturonate reductase	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 45058.31 Da
• Isoelectric Point: 4.9159

>NTDB_id=831346 HX0037_RS03095 WP_330538058.1 754997..756133(-) (rapC) [Bacillus amyloliquefaciens strain HX0037]
MRMKQTIPSSFVGLKINEWYTHIRQFHVLEAERVKREVEREIEDMEEDQDLLLYYSLMEFRHRVMLDYIKPLKEDPSQPE
FSELLEDIEGNQYKLTGLLDYYFNFFRGMYEFKQKMFLNAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFYNLKQTYVS
MSYAVQALETYQSYETYNVRRIQCEFVIAGNYDDMQYPERALPHLELALDLAKQEGNPRLISSALYNLGNCYEKMGDLSK
AAEYFETSVSICRSEKFDNLPHSIYSLTQVLYKQNTTAEAEKLYRLGLSIAREYNDELFVNLFQFLHALYGKEMDNASVR
HTFDFLEEHMLYPYVEELAHDAAKFYMKHGQPEKALTFYEKMVHAQKQIQRGDCLYEI

Nucleotide

• Length: 1137 bp

>NTDB_id=831346 HX0037_RS03095 WP_330538058.1 754997..756133(-) (rapC) [Bacillus amyloliquefaciens strain HX0037]
TTGAGGATGAAGCAGACTATTCCGTCCTCTTTTGTCGGGCTCAAAATTAATGAATGGTATACCCATATCCGGCAGTTTCA
CGTCCTTGAGGCGGAGCGCGTCAAACGTGAAGTAGAGAGAGAGATTGAGGATATGGAAGAAGATCAGGATCTGCTGCTGT
ATTATTCATTAATGGAATTCAGACACCGCGTCATGCTGGATTACATCAAGCCCTTAAAGGAGGACCCTTCTCAGCCTGAG
TTTTCAGAATTATTGGAAGACATTGAAGGCAACCAGTATAAACTGACAGGACTGCTTGATTACTACTTTAATTTTTTTCG
AGGAATGTACGAATTTAAACAGAAAATGTTCCTAAACGCCATGATGTATTACAAACGGGCTGAAAAAAACCTTGCACTCG
TTTCTGATGACATCGAGAAAGCTGAGTTTGCTTTTAAAATGGCCGAGATTTTTTACAACCTGAAACAAACCTACGTCTCC
ATGAGTTATGCCGTTCAAGCCCTTGAAACGTACCAATCGTATGAGACGTACAACGTCCGCAGAATCCAATGTGAATTCGT
TATTGCAGGGAATTATGATGACATGCAGTATCCAGAAAGAGCATTGCCCCACTTAGAACTTGCTTTAGATCTTGCAAAAC
AAGAAGGCAATCCCCGTCTTATCAGTTCAGCCTTATATAATCTCGGAAACTGTTACGAAAAAATGGGAGACCTCTCTAAA
GCAGCCGAATATTTTGAGACATCCGTTTCCATTTGCAGGTCAGAAAAGTTCGATAATCTTCCGCATTCTATTTACTCATT
AACACAGGTTCTTTATAAACAGAACACTACAGCCGAAGCAGAGAAGCTATATCGCCTCGGGCTCAGTATCGCCCGCGAAT
ACAATGATGAATTGTTTGTCAATCTGTTCCAATTTTTGCATGCGTTATACGGCAAGGAAATGGATAACGCATCCGTCAGG
CACACGTTTGATTTTCTGGAAGAACACATGCTGTATCCGTATGTGGAAGAATTGGCGCATGACGCTGCCAAATTTTACAT
GAAACACGGACAGCCTGAAAAAGCGCTCACGTTTTATGAAAAAATGGTGCACGCCCAAAAACAAATCCAGAGAGGAGATT
GTCTATATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-67)

• Tetratricopeptide repeat (TPR_12) (221-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.415	99.471	0.442
rapF	Bacillus subtilis subsp. subtilis str. 168	42.48	100	0.426