Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   OPT59_RS10865 Genome accession   NZ_CP125360
Coordinates   2200993..2201706 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_120444     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2195993..2206706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT59_RS10855 (OPT59_10855) treC 2197063..2198691 (-) 1629 WP_165737068.1 alpha,alpha-phosphotrehalase -
  OPT59_RS10860 (OPT59_10860) treP 2198758..2200782 (-) 2025 WP_003059974.1 PTS system trehalose-specific EIIBC component -
  OPT59_RS10865 (OPT59_10865) treR 2200993..2201706 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  OPT59_RS10870 (OPT59_10870) - 2201985..2202322 (-) 338 Protein_2083 helix-turn-helix domain-containing protein -
  OPT59_RS10875 (OPT59_10875) - 2202509..2203365 (+) 857 Protein_2084 VOC family protein -
  OPT59_RS10880 (OPT59_10880) yaaA 2203407..2204138 (+) 732 WP_152652249.1 peroxide stress protein YaaA -
  OPT59_RS10885 (OPT59_10885) nrdG 2204312..2204926 (-) 615 WP_003058750.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  OPT59_RS10890 (OPT59_10890) - 2204930..2205433 (-) 504 WP_152652248.1 GNAT family N-acetyltransferase -
  OPT59_RS10895 (OPT59_10895) - 2205442..2206377 (-) 936 WP_012767638.1 Gfo/Idh/MocA family oxidoreductase -
  OPT59_RS10900 (OPT59_10900) - 2206406..2206552 (-) 147 WP_003053094.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=831299 OPT59_RS10865 WP_002982243.1 2200993..2201706(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=831299 OPT59_RS10865 WP_002982243.1 2200993..2201706(+) (treR) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679