Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   OPT59_RS01930 Genome accession   NZ_CP125360
Coordinates   362452..363522 (+) Length   356 a.a.
NCBI ID   WP_003057822.1    Uniprot ID   A0AAE9U680
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_120444     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 357452..368522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT59_RS01915 (OPT59_01915) amiA 357970..359949 (+) 1980 WP_065361437.1 peptide ABC transporter substrate-binding protein Regulator
  OPT59_RS01920 (OPT59_01920) amiC 360015..361517 (+) 1503 WP_003057826.1 ABC transporter permease Regulator
  OPT59_RS01925 (OPT59_01925) amiD 361517..362443 (+) 927 WP_003049687.1 oligopeptide ABC transporter permease OppC Regulator
  OPT59_RS01930 (OPT59_01930) amiE 362452..363522 (+) 1071 WP_003057822.1 ABC transporter ATP-binding protein Regulator
  OPT59_RS01935 (OPT59_01935) amiF 363515..364438 (+) 924 WP_003057816.1 ABC transporter ATP-binding protein Regulator
  OPT59_RS01940 (OPT59_01940) - 364466..365450 (-) 985 Protein_326 IS30 family transposase -
  OPT59_RS01945 (OPT59_01945) - 365662..366684 (+) 1023 WP_173363195.1 IS30 family transposase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 39607.62 Da        Isoelectric Point: 5.6648

>NTDB_id=831262 OPT59_RS01930 WP_003057822.1 362452..363522(+) (amiE) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELIEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TELKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHSKAKELALDYMNKVGIPNATKRFDDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLANESGELYSIPGTPPSLYSPIVGDAFALRSEYAMVLDFEETPPAISVSDTHWAK
TWLLHPEAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=831262 OPT59_RS01930 WP_003057822.1 362452..363522(+) (amiE) [Streptococcus dysgalactiae subsp. equisimilis strain UT_120444]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTGGAATTCGACGTGCGCGACCGTGTTTTAACGGC
TATTCGGAACGTTTCTTTAGAGCTTATTGAAGGAGAGGTCCTTGCTTTTGTAGGAGAATCAGGTTCAGGTAAATCTGTTT
TAACCAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGTATTGCCAACGGCTCGATTGTCTACCGTGGTCAAGAATTA
ACAGAACTAAAAACGAATAAGGAATGGGCTAAGATTCGTGGTTCAAAAATTGCTACTATTTTCCAAGATCCAATGACCAG
TCTTAGTCCTATCAAAACCATTGGTAGCCAGATTACAGAGGTCATTATCAAGCATCAAAAAGTTAGCCATTCTAAAGCCA
AAGAATTGGCGCTTGATTATATGAATAAAGTTGGTATTCCAAATGCGACAAAGCGTTTTGATGACTATCCATTTGAATAT
TCAGGTGGTATGCGCCAACGTATTGTTATTGCCATTGCGTTAGCTTGCCGCCCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCTCTCGATGTTACAATACAAGCCCAAATTATTGAATTGTTGAAATCACTTCAAAAAGAGTACCATTTTACGATTA
TTTTTATCACTCATGATTTAGGTGTTGTGGCAAGTATTGCTGACAAGGTTGCTGTCATGTATGCTGGTGAAATTGTCGAG
TTTGGAACTGTTGAAGAAATTTTCTATGATCCACGTCATCCTTACACATGGAGTTTATTGTCAAGCTTACCGCAATTAGC
CAATGAGTCAGGAGAACTTTACTCAATTCCAGGGACACCACCGTCACTTTATTCGCCAATCGTTGGAGATGCATTTGCGC
TTCGCTCAGAATATGCTATGGTTTTGGATTTCGAAGAGACACCACCTGCTATTAGTGTATCTGATACTCATTGGGCAAAA
ACATGGCTTTTGCACCCAGAGGCGCCAAAAGTTCAGAAACCGGCAGTTATTCAAGATTTACATCAAAAAATCTTGAAAAA
AATGTCACGACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY)

(239-299)

ABC transporter (ABC_tran)

(29-187)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

77.5

100

0.784
  amiE Streptococcus thermophilus LMG 18311

76.389

100

0.772
  amiE Streptococcus thermophilus LMD-9

76.389

100

0.772
  oppD Streptococcus mutans UA159

57.27

94.663

0.542