Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   OPT60_RS07570 Genome accession   NZ_CP125359
Coordinates   1532597..1533634 (-) Length   345 a.a.
NCBI ID   WP_065957291.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain UT_10236     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1527597..1538634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OPT60_RS07545 (OPT60_07545) rbsC 1527619..1528560 (-) 942 WP_022554979.1 hypothetical protein -
  OPT60_RS07550 (OPT60_07550) - 1528562..1530040 (-) 1479 WP_084916587.1 sugar ABC transporter ATP-binding protein -
  OPT60_RS07555 (OPT60_07555) rbsD 1530056..1530454 (-) 399 WP_003051896.1 D-ribose pyranase -
  OPT60_RS07560 (OPT60_07560) rbsK 1530429..1531340 (-) 912 WP_003061715.1 ribokinase -
  OPT60_RS07565 (OPT60_07565) - 1531333..1532316 (-) 984 WP_003053684.1 LacI family DNA-binding transcriptional regulator -
  OPT60_RS07570 (OPT60_07570) sepM 1532597..1533634 (-) 1038 WP_065957291.1 SepM family pheromone-processing serine protease Regulator
  OPT60_RS07575 (OPT60_07575) coaD 1533621..1534112 (-) 492 WP_065957290.1 pantetheine-phosphate adenylyltransferase -
  OPT60_RS07580 (OPT60_07580) rsmD 1534102..1534641 (-) 540 WP_014612463.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  OPT60_RS07585 (OPT60_07585) asnA 1534876..1535868 (-) 993 WP_003061055.1 aspartate--ammonia ligase -
  OPT60_RS07590 (OPT60_07590) arcC 1536195..1537145 (-) 951 WP_046178063.1 carbamate kinase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37617.20 Da        Isoelectric Point: 9.4270

>NTDB_id=831228 OPT60_RS07570 WP_065957291.1 1532597..1533634(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
MKTIKKIKWWLISLIALVALLIVLFFPLPYYVEMPGGAYDIRTVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDISKDSTFKGTLNLADTVTGVNHK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSAEKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKDGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALAYLRQ

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=831228 OPT60_RS07570 WP_065957291.1 1532597..1533634(-) (sepM) [Streptococcus dysgalactiae subsp. equisimilis strain UT_10236]
ATGAAAACAATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCGTCCTTTTTTTCCC
TCTTCCTTATTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGAACTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGATACCACAGGCGGTTATAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTAT
ATGTGTTAGATATTAGCAAGGATTCAACCTTTAAAGGTACTTTAAACTTAGCAGATACGGTAACGGGAGTGAATCACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGTGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGAGAAAATCGAGTTTAGTACCCAAGGTGTTGGGGGTCCTAGCGCAGGCTTAATGTTT
ACATTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGGACAGGAACCATTGGTAA
AGATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAGCCTACCTTCGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

71.304

100

0.713