Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QL286_RS17055 Genome accession   NZ_CP125299
Coordinates   3411830..3412780 (-) Length   316 a.a.
NCBI ID   WP_194220524.1    Uniprot ID   -
Organism   Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3406830..3417780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL286_RS17035 - 3407482..3408990 (+) 1509 WP_283152810.1 hypothetical protein -
  QL286_RS17040 - 3409031..3409990 (-) 960 WP_194220527.1 siderophore ABC transporter substrate-binding protein -
  QL286_RS17045 - 3410135..3410893 (-) 759 WP_194220526.1 ABC transporter ATP-binding protein -
  QL286_RS17050 - 3410890..3411837 (-) 948 WP_194220525.1 iron chelate uptake ABC transporter family permease subunit -
  QL286_RS17055 ceuB 3411830..3412780 (-) 951 WP_194220524.1 ABC transporter permease Machinery gene
  QL286_RS17060 - 3412968..3413483 (-) 516 WP_194220523.1 GrpB family protein -
  QL286_RS17065 - 3413990..3415447 (+) 1458 WP_283152811.1 MDR family MFS transporter -
  QL286_RS17070 - 3415577..3416089 (+) 513 WP_283152812.1 DUF3189 family protein -
  QL286_RS17075 - 3416127..3417356 (-) 1230 WP_283152813.1 MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35020.46 Da        Isoelectric Point: 9.9540

>NTDB_id=830997 QL286_RS17055 WP_194220524.1 3411830..3412780(-) (ceuB) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
MKKRYLISLFILLSFISLFIGVKSMSPLEVFNFTEEQSQVFWISRVPRLVSIIIAGASMSICGLIMQQLSRNKFVSPTTA
GTMDAARLGILVSLILFSSASLMQKMMISFLFALAGTFLFMKVLDRVKYKDAIFIPLVGLMFGNVLGSITTFFAYKYDLM
QSIGSWLQGDFSVVLKGQYELLYISVPGLIIAYIYANRFTIAGMGEDFSVNLGLKYKQIVNIGLVIVALVTTVVMLTVGA
IPFLGLIIPNIVSIMMGDNLKANLFPTAMMGAVFVLICDILGRLIIYPYEISIGLMVGVIGSILFIYLLLRRRAYV

Nucleotide


Download         Length: 951 bp        

>NTDB_id=830997 QL286_RS17055 WP_194220524.1 3411830..3412780(-) (ceuB) [Pseudalkalibacillus hwajinpoensis strain MABIK MI00000821]
ATGAAGAAAAGATACTTAATTAGTTTATTTATTTTATTATCCTTTATATCCCTGTTTATTGGGGTCAAAAGCATGTCACC
ACTCGAGGTATTTAATTTCACGGAGGAGCAGAGTCAGGTGTTCTGGATTAGTCGAGTTCCGCGTCTCGTTAGTATTATTA
TTGCCGGAGCCAGTATGAGTATTTGTGGACTTATTATGCAGCAGCTTAGTCGTAATAAGTTTGTCTCTCCAACAACGGCG
GGTACGATGGATGCTGCTAGACTTGGGATTCTCGTTTCCCTTATCTTATTTTCCTCCGCTAGCTTAATGCAAAAAATGAT
GATTTCGTTTCTGTTCGCTTTAGCGGGTACGTTCCTTTTTATGAAGGTGCTCGATCGAGTGAAATATAAGGATGCGATCT
TCATTCCACTAGTAGGGTTGATGTTTGGGAATGTCCTGGGGTCAATTACTACGTTTTTCGCGTATAAGTATGATTTAATG
CAGAGCATCGGTTCATGGCTGCAGGGGGATTTCTCAGTCGTATTAAAAGGACAGTATGAACTATTATACATAAGCGTTCC
AGGACTTATCATCGCCTACATTTACGCCAATCGATTTACGATTGCTGGAATGGGTGAAGACTTCTCAGTTAATCTTGGCT
TAAAGTATAAACAGATTGTTAACATCGGACTCGTTATCGTTGCTTTGGTGACAACCGTTGTCATGTTAACAGTAGGAGCC
ATTCCATTTCTCGGTTTGATTATCCCTAATATCGTCTCGATCATGATGGGGGATAATCTGAAAGCGAATCTGTTTCCAAC
TGCCATGATGGGCGCAGTATTTGTGTTAATCTGTGATATTCTTGGGCGATTGATTATCTATCCTTATGAAATATCGATTG
GTTTGATGGTTGGCGTAATCGGAAGTATTCTATTTATTTACTTGTTGTTAAGGAGAAGAGCTTATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.923

98.734

0.513